RPSBLAST alignment for GI: 254780784 and conserved domain: COG0689

>gnl|CDD|31033 COG0689, Rph, RNase PH [Translation, ribosomal structure and biogenesis]. Length = 230
 Score = 56.8 bits (137), Expect = 2e-08
 Identities = 49/217 (22%), Positives = 89/217 (41%), Gaps = 12/217 (5%)

Query: 14  RPLKLETGRIARQSDGAVLATYGETVVLATVVYDRSLKDGQDFFPLTVNYQERTYAVGKI 73
           RP+K+  G +   ++G+ L  +G T V+ TV      ++    F         T   G +
Sbjct: 19  RPIKITRGVLKH-AEGSSLIEFGNTKVICTVS---GPREPVPRFLRGTGKGWLTAEYGML 74

Query: 74  PGGYLRRESRPTEN--EILISRMIDRSIRPLFSKCYKNETQVII--NVMQHDLESSPHVV 129
           P     R+ R  +      ISR+I R++R +       E+ + I  +V+Q D        
Sbjct: 75  PRSTDERKKREADRGRTKEISRLIGRALRAVIDLELLPESTIDIDCDVLQADG--GTRTA 132

Query: 130 SMVAASAALMLSGLPFEGPVVGAQVDYINGQYVLNPRLDEDQGSL-DLFVSGTQDAVLMV 188
           S+  AS AL  +G+P    V    V  ++G  VL+   +ED  +  D+ V  T +   +V
Sbjct: 133 SITGASLALADAGIPLRDLVAAISVGIVDGVIVLDLDYEEDSAAEADMNVVMTGNG-GLV 191

Query: 189 ELEANQLSEDVVLDAIIFGHNECKPVIEAISKLAKMC 225
           E++          D ++   +        + +L +  
Sbjct: 192 EIQGLAEDGPFTEDELLELLDLAIKGCNELRELQREA 228