RPSBLAST alignment for GI: 254780784 and conserved domain: COG0689
>gnl|CDD|31033 COG0689, Rph, RNase PH [Translation, ribosomal structure and biogenesis]. Length = 230
Score = 56.8 bits (137), Expect = 2e-08
Identities = 49/217 (22%), Positives = 89/217 (41%), Gaps = 12/217 (5%)
Query: 14 RPLKLETGRIARQSDGAVLATYGETVVLATVVYDRSLKDGQDFFPLTVNYQERTYAVGKI 73
RP+K+ G + ++G+ L +G T V+ TV ++ F T G +
Sbjct: 19 RPIKITRGVLKH-AEGSSLIEFGNTKVICTVS---GPREPVPRFLRGTGKGWLTAEYGML 74
Query: 74 PGGYLRRESRPTEN--EILISRMIDRSIRPLFSKCYKNETQVII--NVMQHDLESSPHVV 129
P R+ R + ISR+I R++R + E+ + I +V+Q D
Sbjct: 75 PRSTDERKKREADRGRTKEISRLIGRALRAVIDLELLPESTIDIDCDVLQADG--GTRTA 132
Query: 130 SMVAASAALMLSGLPFEGPVVGAQVDYINGQYVLNPRLDEDQGSL-DLFVSGTQDAVLMV 188
S+ AS AL +G+P V V ++G VL+ +ED + D+ V T + +V
Sbjct: 133 SITGASLALADAGIPLRDLVAAISVGIVDGVIVLDLDYEEDSAAEADMNVVMTGNG-GLV 191
Query: 189 ELEANQLSEDVVLDAIIFGHNECKPVIEAISKLAKMC 225
E++ D ++ + + +L +
Sbjct: 192 EIQGLAEDGPFTEDELLELLDLAIKGCNELRELQREA 228