RPSBLAST alignment for GI: 254780784 and conserved domain: COG1185
>gnl|CDD|31378 COG1185, Pnp, Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase) [Translation, ribosomal structure and biogenesis]. Length = 692
Score = 886 bits (2292), Expect = 0.0
Identities = 380/694 (54%), Positives = 507/694 (73%), Gaps = 4/694 (0%)
Query: 1 MFDVHTVEIEWAGRPLKLETGRIARQSDGAVLATYGETVVLATVVYDRSLKDGQDFFPLT 60
MF+ IEW GR L LETG+IARQ++GAVL YG+TVVLATVV + K+GQDFFPLT
Sbjct: 1 MFNKIVKTIEWGGRTLTLETGKIARQANGAVLVRYGDTVVLATVVASK-PKEGQDFFPLT 59
Query: 61 VNYQERTYAVGKIPGGYLRRESRPTENEILISRMIDRSIRPLFSKCYKNETQVIINVMQH 120
VNY+E+TYA GKIPGG+ +RE RP+E EIL SR+IDR IRPLF K ++NE Q++ V+
Sbjct: 60 VNYEEKTYAAGKIPGGFFKREGRPSEKEILTSRLIDRPIRPLFPKGFRNEVQIVNTVLSV 119
Query: 121 DLESSPHVVSMVAASAALMLSGLPFEGPVVGAQVDYINGQYVLNPRLDE-DQGSLDLFVS 179
D E+ P +++MV ASAAL LSG+PF GP+ +V YI+G +VLNP L+E ++ LDL V+
Sbjct: 120 DPENDPDILAMVGASAALSLSGIPFLGPIGAVRVGYIDGIFVLNPTLEELEESKLDLVVA 179
Query: 180 GTQDAVLMVELEANQLSEDVVLDAIIFGHNECKPVIEAISKLAKMCAKEPIVIDSKDF-S 238
GT+DAV MVE EA++L E+V+L+A+ FGH + VI A +LA K+ ++
Sbjct: 180 GTKDAVNMVESEADELDEEVMLEAVEFGHEAIQSVINAQEELALEVGKKKWELEPPSLDE 239
Query: 239 KLEEEMSQMIKEDLRVSCFIPEKYVRCKQIDDLKKKMVSYFSSEHSSWNEGEIVSVFEDI 298
+LE ++ + +++L+ + I EK R +D +K+K+ S E S + EI ++ E +
Sbjct: 240 ELEAKVRDLAEDELKEAVGIREKQERSAALDAIKEKIEEELSGEEES-SLKEIKAILEKL 298
Query: 299 QAKVVRTVMLDKKVRMDGRDSETVRDISAQVGLLQRTHGSSLFIRGDTQAIVVVTLGTRE 358
+ K VR ++L+ KVR+DGR + VR I +VG+L RTHGS+LF RG+TQA+VVVTLGT
Sbjct: 299 EKKPVRRLILEGKVRIDGRFGDEVRPIGIEVGVLPRTHGSALFTRGETQALVVVTLGTPR 358
Query: 359 DEQYVDSLSGTQRNDFMMHYNFLPCATGEVSRMGAPSRREIGHGRLARRAIHPVLPQTAQ 418
D Q +D L G + F++HYNF P + GE RMG+P RREIGHG LA RA+ PVLP +
Sbjct: 359 DAQVIDILEGEYKKRFLLHYNFPPFSVGETGRMGSPGRREIGHGALAERALAPVLPSEEE 418
Query: 419 FPYTLRIVSEITESDGSSSMATVCGSSLALMDAGVPISKPVAGIAMGLVKDGDDFIILSD 478
FPYT+R+VSEI ES+GSSSMA+VCG SLALMDAGVPI PVAGIAMGL+K+GD + +LSD
Sbjct: 419 FPYTIRVVSEILESNGSSSMASVCGGSLALMDAGVPIKAPVAGIAMGLIKEGDKYAVLSD 478
Query: 479 ISGDEDHLGHMDFKVAGTDSGITAMQMDMKIGGISENIMVMALQQAKRGRLHILNEMSKV 538
I GDEDHLG MDFKVAGTD GITA+QMD+KI GI++ IM AL+QAK RLHIL M++
Sbjct: 479 ILGDEDHLGDMDFKVAGTDDGITALQMDIKIKGITKEIMKKALEQAKGARLHILIVMNEA 538
Query: 539 LSESRLQLGEFTPRVEIMAIPPDQIRNVIGMGGKVIRGIVEQTGAKVNIDDDGTVKIASS 598
+SE R +L + PR+E + I PD+IR+VIG GGK I+ I E+TG K++I+DDGTVKIA+S
Sbjct: 539 ISEPRKELSPYAPRIETIKIDPDKIRDVIGPGGKTIKAITEETGVKIDIEDDGTVKIAAS 598
Query: 599 SLAEIEAAREMIRSITDVPEVNKIYKGQVVKVMDFGAFVHFCGARDGLVHISQLSTERVA 658
+ A+E I +IT EV ++Y+G VV+++DFGAFV +DGLVHISQL+ ERV
Sbjct: 599 DGESAKKAKERIEAITREVEVGEVYEGTVVRIVDFGAFVELLPGKDGLVHISQLAKERVE 658
Query: 659 KTSDVVKEGDTVWVKLLDFDDRGKIKLSMKVVDQ 692
K DV+KEGD V VK+++ D +G+I+LS+K V +
Sbjct: 659 KVEDVLKEGDEVKVKVIEIDKQGRIRLSIKAVLE 692