RPSBLAST alignment for GI: 254780784 and conserved domain: KOG1068

>gnl|CDD|36286 KOG1068, KOG1068, KOG1068, Exosomal 3'-5' exoribonuclease complex, subunit Rrp41 and related exoribonucleases [Translation, ribosomal structure and biogenesis]. Length = 245

 Score = 69.2 bits (169), Expect = 4e-12
 Identities = 56/243 (23%), Positives = 101/243 (41%), Gaps = 14/243 (5%)

Query: 309 DKKVRMDGRDSETVRDISAQVGLLQRTHGSSLFIRGDTQAIVVVTLGTREDEQYVDSLSG 368
           ++ +R DGR    +R I A++G+L +  GS+   +G+T+ +  V  G RE      S   
Sbjct: 10  EEGLRTDGRRPNELRRIYARIGVLTQADGSAYMEQGNTKVLCAVY-GPREIRGK--SARR 66

Query: 369 TQRNDFMMHYNFLPCATGEVSRMGAPSRREIGHGRLARRAIHPVLPQTAQFPYT-LRIVS 427
             +       +    +TG+  +     RRE     + ++A  PV+     +P + + I  
Sbjct: 67  PDKAVLNCEVSSAQFSTGDRKKRPKGDRREKELSLMLQQAFEPVI-LLELYPRSQIDIYV 125

Query: 428 EITESDGSSSMATVCGSSLALMDAGVPISKPVAGIAMGLVKDGDDFIILSDISGDEDHLG 487
           ++ E DGS+  A +  ++LAL DAG+P+   +     GL         L D++  E+   
Sbjct: 126 QVLEDDGSNLAAAINAATLALADAGIPMYDLITACTAGLADG----TPLLDLTSLEESAR 181

Query: 488 HMDFKVA--GTDSGITAMQMDMKIGGISENIMVMALQQAKRGRLHILNEMSKVLSESRLQ 545
                VA       I  +Q+D     +  + +   L+ A  G   +   +  VL E    
Sbjct: 182 APGLTVAALPNREEIALLQLD---ERLHCDHLETVLELAIAGCKRVYERLRLVLREHLKN 238

Query: 546 LGE 548
              
Sbjct: 239 AES 241