HHSEARCH alignment of GI: 254780785 and SCOP domain: d1vs5o1

Alignment

Probab=100.00  E-value=1.3e-37  Score=226.25  Aligned_cols=88  Identities=48%  Similarity=0.728  Sum_probs=87.1

Q ss_pred             CCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH
Q ss_conf             88889999999995458887888999999977999999999997784135277899999978999999984099999999
Q gi|254780785|r    2 SITLERKRELMKEYAVSPGDTGSPEVQVAVCTERIANLTEHFKSAKKDVNSKIGLGRLISLRSSLLKYLERKDVERYKRL   81 (89)
Q Consensus         2 ~~~~~~k~~~i~~f~~~~~DtGS~evQIA~lT~rI~~L~~Hl~~~kKD~~s~rgL~~lv~kRkklL~YLk~~d~~~Y~~~   81 (89)
                      |+++++|+++|++||+||+||||||||||+||+||.+|++||+.||||++|+|||.+||++|++||+||+++|+++|.++
T Consensus         1 ~l~~~~k~~ii~~~~~~~~DtGS~evQiA~lT~rI~~Lt~Hl~~~kKD~~s~rgL~~lv~kRkklL~YL~~~d~~~Y~~v   80 (88)
T d1vs5o1           1 SLSTEATAKIVSEFGRDANDTGSTEVQVALLTAQINHLQGHFAEHKKDHHSRRGLLRMVSQRRKLLDYLKRKDVARYTRL   80 (88)
T ss_dssp             CCCHHHHHHHHHHHCSSSSCTTCHHHHHHHHHHHHHHHHHHHHSSCCCCTTHHHHHHHHHHHHHHHHHHHTTCHHHHHHH
T ss_pred             CCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHH
T ss_conf             98779999999998689998788579898779999999999987665410399999999999999999986599999999


Q ss_pred             HHHHCCCC
Q ss_conf             99836899
Q gi|254780785|r   82 VQSLKLRR   89 (89)
Q Consensus        82 i~~LglRk   89 (89)
                      |++|||||
T Consensus        81 i~~LgLrk   88 (88)
T d1vs5o1          81 IERLGLRR   88 (88)
T ss_dssp             HTTTTCCC
T ss_pred             HHHHCCCC
T ss_conf             99958999

SCOP domain information

class: All alpha proteins
fold: S15/NS1 RNA-binding domain
superfamily: S15/NS1 RNA-binding domain
family: Ribosomal protein S15
domain: Ribosomal protein S15
species: Escherichia coli [TaxId: 562]