RPSBLAST alignment for GI: 254780785 and conserved domain: cd00353
>gnl|CDD|48353 cd00353, Ribosomal_S15p_S13e, Ribosomal protein S15 (prokaryotic)_S13 (eukaryotic) binds the central domain of 16S rRNA and is required for assembly of the small ribosomal subunit and for intersubunit association, thus representing a key element in the assembly of the whole ribosome. S15 also plays an important autoregulatory role by binding and preventing its own mRNA from being translated. S15 has a predominantly alpha-helical fold that is highly structured except for the N-terminal alpha helix.. Length = 80
Score = 78.2 bits (193), Expect = 5e-16
Identities = 45/79 (56%), Positives = 61/79 (77%)
Query: 7 RKRELMKEYAVSPGDTGSPEVQVAVCTERIANLTEHFKSAKKDVNSKIGLGRLISLRSSL 66
+K+E++KE+ ++ GDTGSPEVQ+A+ TERI NLTEH + KKD +SK GL L+S R L
Sbjct: 1 KKQEILKEFGLAEGDTGSPEVQLALLTERIVNLTEHLEKNKKDKHSKRGLLLLVSKRRRL 60
Query: 67 LKYLERKDVERYKRLVQSL 85
LKYL+RKD RY+ L++ L
Sbjct: 61 LKYLKRKDRLRYEWLIEKL 79