HHsearch alignment for GI: 254780786 and conserved domain: PRK13816
>PRK13816 ribosome-binding factor A; Provisional.
Probab=100.00 E-value=1.9e-33 Score=209.23 Aligned_cols=111 Identities=26% Similarity=0.363 Sum_probs=100.7
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEEECCCCCEEEEEEEECCCC--------CHHHHHHHHHHHH
Q ss_conf 77389999999999999999514134201265168988889858756559999827986--------4778999999856
Q gi|254780786|r 8 NSRRALRVGEEVRSALMWVILNNEFQDRLISRDVISISEVCMSVDLRVATVYISLPLDV--------SPDRVISALNCNI 79 (128)
Q Consensus 8 ~s~R~~rv~~~i~~~is~il~~~~~~d~~~~~~~vtIt~V~vS~Dl~~AkVyvs~~~~~--------~~~~~~~~L~~~~ 79 (128)
T Consensus 1 gs~R~~Rv~~~I~~els~ii~~-evkDprl~~-~VTIT~V~vS~DL~~AkVyvSvlg~~~~~~~~~~~~~~~l~~L~~a~ 78 (131)
T PRK13816 1 GGQRLKRMADSVQRELSELIRQ-ELKDPRLGG-LVTISGVKVSPDLGYADVYVTVMGRELSDDQNEVAHRETLDVLNKAS 78 (131)
T ss_pred CCHHHHHHHHHHHHHHHHHHHH-HCCCCCCCC-CEEEEEEEECCCCCEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHH
T ss_conf 9727799999999999999997-565976478-46897999779977479999976674552023666999999999989
Q ss_pred HHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHCCHH
Q ss_conf 899999999875214578589997386888999999855767
Q gi|254780786|r 80 KFIRGRIGRSLRNLRYVPELRFRYDTSLQSYWKLNALMCLPK 121 (128)
Q Consensus 80 ~~ir~~l~~~l~~lr~~P~L~F~~D~s~e~~~~I~~LL~~~~ 121 (128)
T Consensus 79 gfiR~~Lak~l-~lR~~P~L~F~~D~s~e~~~~i~~Li~~~~ 119 (131)
T PRK13816 79 GFLRQELSRRI-KTRITPRLRFHYDKTNAYGNYMFGLIEKAV 119 (131)
T ss_pred HHHHHHHHHHC-CCCCCCEEEEEECCCHHHHHHHHHHHHHHH
T ss_conf 99999999666-682498789995797889999999999999