HHSEARCH alignment of GI: 254780786 and SCOP domain: d1pa4a_

Alignment
>d1pa4a_ d.52.7.1 (A:) Ribosome-binding factor A, RbfA {Mycoplasma pneumoniae [TaxId: 2104]}
Probab=99.93  E-value=1.1e-27  Score=173.99  Aligned_cols=95  Identities=19%  Similarity=0.250  Sum_probs=88.4

Q ss_pred             HHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEEECCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             99999999999999995141342012651689888898587565599998279864778999999856899999999875
Q gi|254780786|r   12 ALRVGEEVRSALMWVILNNEFQDRLISRDVISISEVCMSVDLRVATVYISLPLDVSPDRVISALNCNIKFIRGRIGRSLR   91 (128)
Q Consensus        12 ~~rv~~~i~~~is~il~~~~~~d~~~~~~~vtIt~V~vS~Dl~~AkVyvs~~~~~~~~~~~~~L~~~~~~ir~~l~~~l~   91 (128)
                      ++|++++|+++||++|.+ +++||+++  +||||+|++|+||++|+||||++++.+.++++++||+++|+||++||+++.
T Consensus         1 ~eR~~~~i~r~is~~l~~-ei~d~~l~--~vtIt~V~vS~Dl~~AkVy~s~~~~~~~~~~~~~L~~~~g~ir~~l~~~l~   77 (96)
T d1pa4a_           1 KERLENDIIRLINRTVIH-EIYNETVK--TGHVTHVKLSDDLLHVTVYLDCYNREQIDRVVGAFNQAKGVFSRVLAHNLY   77 (96)
T ss_dssp             CCHHHHHHHHHHHHHHTT-CSSSSCHH--HHCCSCCEEETTTTEEEECCCCSSSSSHHHHHHHHHHTHHHHHHHHHTTCC
T ss_pred             CHHHHHHHHHHHHHHHHH-HCCCCCCC--CEEEEEEEECCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf             957999999999999998-67796668--158979997799767999998278410689999999989999999997668


Q ss_pred             HCCCCCEEEEEECCCHHHH
Q ss_conf             2145785899973868889
Q gi|254780786|r   92 NLRYVPELRFRYDTSLQSY  110 (128)
Q Consensus        92 ~lr~~P~L~F~~D~s~e~~  110 (128)
                       ||++|+|+|++|+++|++
T Consensus        78 -lr~~P~L~F~~D~s~e~~   95 (96)
T d1pa4a_          78 -LAKAVQIHFVKDKAIDNA   95 (96)
T ss_dssp             -CGGGCCCEECSSSTTSSC
T ss_pred             -CCCCCEEEEEECCCHHCC
T ss_conf             -703886899967864405


SCOP domain information

class: Alpha and beta proteins (a+b)
fold: Alpha-lytic protease prodomain-like
superfamily: Ribosome-binding factor A, RbfA
family: Ribosome-binding factor A, RbfA
domain: Ribosome-binding factor A, RbfA
species: Mycoplasma pneumoniae [TaxId: 2104]