HHsearch alignment for GI: 254780787 and conserved domain: COG0050
>COG0050 TufB GTPases - translation elongation factors [Translation, ribosomal structure and biogenesis].
Probab=99.97 E-value=1.2e-31 Score=234.46 Aligned_cols=203 Identities=30% Similarity=0.330 Sum_probs=153.0
Q ss_pred EEEEECCCCCHHHHHHHHHHHHH----------------HHCCCCCCEECCCEEEEECCCCEEEEEECCCHHHHHHHHHH
Q ss_conf 89862368504467778864222----------------10012310001214999517843888851661578999866
Q gi|254780787|r 386 VTIMGHVDHGKTSLLDAIRKADV----------------AKGEIGGITQHIGAYQVAYQGKNITFLDTPGHAAFYEMRAR 449 (884)
Q Consensus 386 v~v~ghvd~GKt~lld~~r~~~~----------------~~~e~ggitq~iga~~~~~~~~~~~~iDtPGh~~f~~~r~r 449 (884)
T Consensus 15 igtiGHvdHGKTTLtaAit~~la~~~~~~~~~y~~id~aPeEk~rGITIntahveyet~~rhyahVDcPGHaDYvKNMIt 94 (394)
T COG0050 15 VGTIGHVDHGKTTLTAAITTVLAKKGGAEAKAYDQIDNAPEEKARGITINTAHVEYETANRHYAHVDCPGHADYVKNMIT 94 (394)
T ss_pred EEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCHHHHCCCEECCCEEEEECCCCEEEECCCCCHHHHHHHHHH
T ss_conf 87861424763528999999998632401033344304826764572540100588638814886168974899998764
Q ss_pred HHHCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCC-EEEECCCCCCCCCC--CCHHHHHHHCCCCCCCCCCCCCEEEEEE
Q ss_conf 64206805999983667402357778989970994-15612331244332--0002210000132000123474036311
Q gi|254780787|r 450 GARVTDIAVLVLAADEEIMPQAIESINHAKAADVS-IIVAINKIDKLGAD--PQKVRMSLLKHDVFVESMGGDILDVEIS 526 (884)
Q Consensus 450 g~~~~d~~ilvv~~~~g~~~qt~e~~~~~~~~~~p-~iva~nk~d~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 526 (884)
T Consensus 95 gAaqmDgAILVVsA~dGpmPqTrEHiLlarqvGvp~ivvflnK~Dmvdd~ellelVemEvreLLs~y~f~gd~~Pii~gS 174 (394)
T COG0050 95 GAAQMDGAILVVAATDGPMPQTREHILLARQVGVPYIVVFLNKVDMVDDEELLELVEMEVRELLSEYGFPGDDTPIIRGS 174 (394)
T ss_pred HHHHCCCCEEEEECCCCCCCCCHHHHHHHHHCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEECH
T ss_conf 07753762899984789998605642012342885799997422366868999999999999999739998776334112
Q ss_pred ECCC-CCC-------CCCCCCHHCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCHHHHHHCCHHHCCCCCC
Q ss_conf 0024-774-------112210000233334200034866641677788637762000000000000000002
Q gi|254780787|r 527 AKNN-LNL-------DKLLDAILLQAEMLDLKTSINRKAEGIVVEGKLDRGRGPVVTVLVQKGTLSKGNILV 590 (884)
Q Consensus 527 ~~~~-~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 590 (884)
T Consensus 175 al~ale~~~~~~~~i~eLm~avd~yip~P--er~~dkPflmpvEdvfsIsgrgtvvtGrVeRG~lkvg~eve 244 (394)
T COG0050 175 ALKALEGDAKWEAKIEELMDAVDSYIPTP--ERDIDKPFLMPVEDVFSISGRGTVVTGRVERGILKVGEEVE 244 (394)
T ss_pred HHHHHCCCCCHHHHHHHHHHHHHHCCCCC--CCCCCCCCCCCCEEEEEECCCEEEEEEEEEEEEECCCCEEE
T ss_conf 33310377216789999999998548999--86556652010100689757516898788401241587799