HHsearch alignment for GI: 254780787 and conserved domain: COG1160

Probab=99.56  E-value=9.9e-14  Score=111.89  Aligned_cols=151  Identities=25%  Similarity=0.333  Sum_probs=118.7

Q ss_pred             CEEEEEECCCCCHHHHHHHHHHHHHHHCC-CCCCEECCCEEEEECCCCEEEEEECCCHHHHH-----HHHH----HHHHC
Q ss_conf             03898623685044677788642221001-23100012149995178438888516615789-----9986----66420
Q gi|254780787|r  384 PVVTIMGHVDHGKTSLLDAIRKADVAKGE-IGGITQHIGAYQVAYQGKNITFLDTPGHAAFY-----EMRA----RGARV  453 (884)
Q Consensus       384 pvv~v~ghvd~GKt~lld~~r~~~~~~~e-~ggitq~iga~~~~~~~~~~~~iDtPGh~~f~-----~~r~----rg~~~  453 (884)
T Consensus         4 ~~VAIVGRPNVGKSTLFNRL~g~r~AIV~D~pGvTRDr~y~~~~~~~~~f~lIDTgGl~~~~~~~l~~~i~~Qa~~Ai~e   83 (444)
T COG1160           4 PVVAIVGRPNVGKSTLFNRLTGRRIAIVSDTPGVTRDRIYGDAEWLGREFILIDTGGLDDGDEDELQELIREQALIAIEE   83 (444)
T ss_pred             CEEEEECCCCCCHHHHHHHHHCCEEEEEECCCCCCCCCCCCEEEECCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHH
T ss_conf             78999899987589999887577026760699975577545069838607999789977688128999999999999976


Q ss_pred             CCCEEEEEECCCCCCHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCEEEEEEECCCCCC
Q ss_conf             68059999836674023577789899709941561233124433200022100001320001234740363110024774
Q gi|254780787|r  454 TDIAVLVLAADEEIMPQAIESINHAKAADVSIIVAINKIDKLGADPQKVRMSLLKHDVFVESMGGDILDVEISAKNNLNL  533 (884)
Q Consensus       454 ~d~~ilvv~~~~g~~~qt~e~~~~~~~~~~p~iva~nk~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  533 (884)
T Consensus        84 ADvilfvVD~~~Git~~D~~ia~~Lr~~~kpviLvvNK~D~~~--~e~~~~efyslG--------~g~~~~ISA~Hg~Gi  153 (444)
T COG1160          84 ADVILFVVDGREGITPADEEIAKILRRSKKPVILVVNKIDNLK--AEELAYEFYSLG--------FGEPVPISAEHGRGI  153 (444)
T ss_pred             CCEEEEEEECCCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCH--HHHHHHHHHHCC--------CCCCEEEEHHHCCCH
T ss_conf             7999999848878997899999999853998899997666730--456489998647--------898268425535698


Q ss_pred             CCCCCCHHCCC
Q ss_conf             11221000023
Q gi|254780787|r  534 DKLLDAILLQA  544 (884)
Q Consensus       534 ~~~~~~~~~~~  544 (884)
T Consensus       154 ~dLld~v~~~l  164 (444)
T COG1160         154 GDLLDAVLELL  164 (444)
T ss_pred             HHHHHHHHHHC
T ss_conf             99999999756