HHsearch alignment for GI: 254780787 and conserved domain: COG1160
>COG1160 Predicted GTPases [General function prediction only].
Probab=99.46 E-value=3.6e-13 Score=108.02 Aligned_cols=161 Identities=26% Similarity=0.287 Sum_probs=124.4
Q ss_pred CCCEEEEEECCCCCHHHHHHHHHHH-HHHHCCCCCCEECCCEEEEECCCCEEEEEECCC----------HHHHHHHHHHH
Q ss_conf 5303898623685044677788642-221001231000121499951784388885166----------15789998666
Q gi|254780787|r 382 RPPVVTIMGHVDHGKTSLLDAIRKA-DVAKGEIGGITQHIGAYQVAYQGKNITFLDTPG----------HAAFYEMRARG 450 (884)
Q Consensus 382 R~pvv~v~ghvd~GKt~lld~~r~~-~~~~~e~ggitq~iga~~~~~~~~~~~~iDtPG----------h~~f~~~r~rg 450 (884)
T Consensus 177 ~~ikiaiiGrPNvGKSsLiN~ilgeeR~Iv~~~aGTTRD~I~~~~e~~~~~~~liDTAGiRrk~ki~e~~E~~Sv~rt~~ 256 (444)
T COG1160 177 DPIKIAIIGRPNVGKSSLINAILGEERVIVSDIAGTTRDSIDIEFERDGRKYVLIDTAGIRRKGKITESVEKYSVARTLK 256 (444)
T ss_pred CCEEEEEEECCCCCCHHHHHHHCCCCEEEECCCCCCCCCCEEEEEEECCEEEEEEECCCCCCCCCCCCCEEEEEEHHHHH
T ss_conf 75089999278787058887750682598459998622033125899881899998778774664124268875054676
Q ss_pred -HHCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCEEEEEEECC
Q ss_conf -4206805999983667402357778989970994156123312443320002210000132000123474036311002
Q gi|254780787|r 451 -ARVTDIAVLVLAADEEIMPQAIESINHAKAADVSIIVAINKIDKLGADPQKVRMSLLKHDVFVESMGGDILDVEISAKN 529 (884)
Q Consensus 451 -~~~~d~~ilvv~~~~g~~~qt~e~~~~~~~~~~p~iva~nk~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 529 (884)
T Consensus 257 aI~~a~vvllviDa~~~~~~qD~~ia~~i~~~g~~~vIvvNKWDl~~~~~-~~~~~~k~~i~~~l~~l~~a~i~~iSA~~ 335 (444)
T COG1160 257 AIERADVVLLVIDATEGISEQDLRIAGLIEEAGRGIVIVVNKWDLVEEDE-ATMEEFKKKLRRKLPFLDFAPIVFISALT 335 (444)
T ss_pred HHHHCCEEEEEEECCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCHH-HHHHHHHHHHHHHHCCCCCCEEEEEEECC
T ss_conf 78656889999988878368899999999975897499997532578516-67999999999872213677279997047
Q ss_pred CCCCCCCCCCHHCC
Q ss_conf 47741122100002
Q gi|254780787|r 530 NLNLDKLLDAILLQ 543 (884)
Q Consensus 530 ~~~~~~~~~~~~~~ 543 (884)
T Consensus 336 ~~~i~~l~~~i~~~ 349 (444)
T COG1160 336 GQGLDKLFEAIKEI 349 (444)
T ss_pred CCCHHHHHHHHHHH
T ss_conf 87727889999999