HHsearch alignment for GI: 254780787 and conserved domain: COG1217

>COG1217 TypA Predicted membrane GTPase involved in stress response [Signal transduction mechanisms].
Probab=100.00  E-value=1.8e-34  Score=253.69  Aligned_cols=240  Identities=29%  Similarity=0.330  Sum_probs=185.1

Q ss_pred             EEEEEECCCCCHHHHHHHHHHHHHHHCC----------------CCCCEECCCEEEEECCCCEEEEEECCCHHHHHHHHH
Q ss_conf             3898623685044677788642221001----------------231000121499951784388885166157899986
Q gi|254780787|r  385 VVTIMGHVDHGKTSLLDAIRKADVAKGE----------------IGGITQHIGAYQVAYQGKNITFLDTPGHAAFYEMRA  448 (884)
Q Consensus       385 vv~v~ghvd~GKt~lld~~r~~~~~~~e----------------~ggitq~iga~~~~~~~~~~~~iDtPGh~~f~~~r~  448 (884)
T Consensus         7 NIAIIAHVDHGKTTLVD~LLkQSGtf~~~e~v~ERvMDSnDlEkERGITILaKnTav~~~~~~INIvDTPGHADFGGEVE   86 (603)
T COG1217           7 NIAIIAHVDHGKTTLVDALLKQSGTFREREEVAERVMDSNDLEKERGITILAKNTAVNYNGTRINIVDTPGHADFGGEVE   86 (603)
T ss_pred             EEEEEEEECCCCCHHHHHHHHHCCCCCCCCCHHHHHCCCCCHHHHCCCEEEECCCEEECCCEEEEEECCCCCCCCCCHHH
T ss_conf             06899984488102899998731654456520144037642344349389851524620883898765898677662545


Q ss_pred             HHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCHHHHHHHCCCCCC--CCCCCCCEEEEEE
Q ss_conf             66420680599998366740235777898997099415612331244332000221000013200--0123474036311
Q gi|254780787|r  449 RGARVTDIAVLVLAADEEIMPQAIESINHAKAADVSIIVAINKIDKLGADPQKVRMSLLKHDVFV--ESMGGDILDVEIS  526 (884)
Q Consensus       449 rg~~~~d~~ilvv~~~~g~~~qt~e~~~~~~~~~~p~iva~nk~d~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~  526 (884)
T Consensus        87 Rvl~MVDgvlLlVDA~EGpMPQTrFVlkKAl~~gL~PIVVvNKiDrp~Arp~~Vvd~vfDLf~~L~A~deQLdFPivYAS  166 (603)
T COG1217          87 RVLSMVDGVLLLVDASEGPMPQTRFVLKKALALGLKPIVVINKIDRPDARPDEVVDEVFDLFVELGATDEQLDFPIVYAS  166 (603)
T ss_pred             HHHHHCCEEEEEEECCCCCCCCHHHHHHHHHHCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCHHHCCCEEEEEE
T ss_conf             11432334899997555888731444899997499848999677899988789999999999981997455787079854


Q ss_pred             ECCCCC----------CCCCCCCHHCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCHHHHHHCCHHHCCCCCCCCC---
Q ss_conf             002477----------4112210000233334200034866641677788637762000000000000000002566---
Q gi|254780787|r  527 AKNNLN----------LDKLLDAILLQAEMLDLKTSINRKAEGIVVEGKLDRGRGPVVTVLVQKGTLSKGNILVVGD---  593 (884)
Q Consensus       527 ~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~---  593 (884)
T Consensus       167 ~~~G~a~~~~~~~~~~m~pLfe~I~~--hvp~P~~~~d~PlQ~qvt~Ldyn~y~GrIgigRi~~G~vk~~q~V~~i~~~g  244 (603)
T COG1217         167 ARNGTASLDPEDEADDMAPLFETILD--HVPAPKGDLDEPLQMQVTQLDYNSYVGRIGIGRIFRGTVKPNQQVALIKSDG  244 (603)
T ss_pred             CCCCEECCCCCCCCCCHHHHHHHHHH--HCCCCCCCCCCCEEEEEEEECCCCCCCEEEEEEEECCCCCCCCEEEEECCCC
T ss_conf             14751015865555531689999997--5899989998880789985224454522689998527254897689984799


Q ss_pred             --CCCCCEECCCCCC---CCCCCCCCCCCCCCCCCCCC
Q ss_conf             --5554200014665---32210000122211112347
Q gi|254780787|r  594 --QWGKIRALFNDRG---QGISKAVPSMPIEVLGLQGM  626 (884)
Q Consensus       594 --~~~~v~~~~~~~~---~~~~~~~~~~~~~~~~~~~~  626 (884)
T Consensus       245 ~~~~gri~kll~f~GL~R~ei~eA~AGDIvaiaG~~~~  282 (603)
T COG1217         245 TTENGRITKLLGFLGLERIEIEEAEAGDIVAIAGLEDI  282 (603)
T ss_pred             CEEEEEEEEEEECCCEEEEEHHHCCCCCEEEECCCCCC
T ss_conf             47755776665505423335001255678998276435