HHsearch alignment for GI: 254780787 and conserved domain: COG3276
>COG3276 SelB Selenocysteine-specific translation elongation factor [Translation, ribosomal structure and biogenesis].
Probab=99.97 E-value=1.3e-31 Score=234.12 Aligned_cols=226 Identities=23% Similarity=0.315 Sum_probs=177.5
Q ss_pred EEEEEECCCCCHHHHHHHHHHHH--HHHCC-CCCCEECCCEEEEECCCCEEEEEECCCHHHHHHHHHHHHHCCCCEEEEE
Q ss_conf 38986236850446777886422--21001-2310001214999517843888851661578999866642068059999
Q gi|254780787|r 385 VVTIMGHVDHGKTSLLDAIRKAD--VAKGE-IGGITQHIGAYQVAYQGKNITFLDTPGHAAFYEMRARGARVTDIAVLVL 461 (884)
Q Consensus 385 vv~v~ghvd~GKt~lld~~r~~~--~~~~e-~ggitq~iga~~~~~~~~~~~~iDtPGh~~f~~~r~rg~~~~d~~ilvv 461 (884)
T Consensus 2 ii~t~GhidHgkT~L~~altg~~~d~l~EekKRG~TiDlg~~y~~~~d~~~~fIDvpgh~~~i~~miag~~~~d~alLvV 81 (447)
T COG3276 2 IIGTAGHIDHGKTTLLKALTGGVTDRLPEEKKRGITIDLGFYYRKLEDGVMGFIDVPGHPDFISNLLAGLGGIDYALLVV 81 (447)
T ss_pred EEEEEEEEECCCHHHHHHHCCCCCCCCHHHHHCCCEEEEEEEECCCCCCCEEEEECCCCHHHHHHHHHHHCCCCEEEEEE
T ss_conf 69974002014302233302553320545661584684205732577773688618984788999985405774589998
Q ss_pred ECCCCCCHHHHHHHHHHHHCCCCE-EEECCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCH
Q ss_conf 836674023577789899709941-5612331244332000221000013200012347403631100247741122100
Q gi|254780787|r 462 AADEEIMPQAIESINHAKAADVSI-IVAINKIDKLGADPQKVRMSLLKHDVFVESMGGDILDVEISAKNNLNLDKLLDAI 540 (884)
Q Consensus 462 ~~~~g~~~qt~e~~~~~~~~~~p~-iva~nk~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 540 (884)
T Consensus 82 ~~deGl~~qtgEhL~iLdllgi~~giivltk~D~~d~~--r~e~~i~~Il~~l~--l~~~~i~~~s~~~g~Gi~~Lk~~l 157 (447)
T COG3276 82 AADEGLMAQTGEHLLILDLLGIKNGIIVLTKADRVDEA--RIEQKIKQILADLS--LANAKIFKTSAKTGRGIEELKNEL 157 (447)
T ss_pred ECCCCCCHHHHHHHHHHHHCCCCCEEEEEECCCCCCHH--HHHHHHHHHHHHCC--CCCCCCCCCCCCCCCCHHHHHHHH
T ss_conf 47557664368899999861987328999622344678--89999999986502--000323011012578779999999
Q ss_pred HCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCHHHHHHCCHHHCCCCCCCCCC--CCCCEECCCCCCCCCCCCCCCCC
Q ss_conf 002333342000348666416777886377620000000000000000025665--55420001466532210000122
Q gi|254780787|r 541 LLQAEMLDLKTSINRKAEGIVVEGKLDRGRGPVVTVLVQKGTLSKGNILVVGDQ--WGKIRALFNDRGQGISKAVPSMP 617 (884)
Q Consensus 541 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~--~~~v~~~~~~~~~~~~~~~~~~~ 617 (884)
T Consensus 158 ~~L~~--~~e~d~~~~fri~IDraFtVKGvGTVVtGtv~sG~V~v~D~L~l~p~~k~v~VRsIq~-~d~d~~~a~AG~R 233 (447)
T COG3276 158 IDLLE--EIERDEQKPFRIAIDRAFTVKGVGTVVTGTVLSGEVKVGDKLYLSPINKEVRVRSIQA-HDVDVEEAKAGQR 233 (447)
T ss_pred HHHHH--HHHHCCCCCEEEEEEEEEEECCCCEEEEEEEEEEEEEECCEEEEECCCCEEEEEEEEE-CCCCHHHCCCCCE
T ss_conf 87520--0554047865999755799513317998678643588788899905897689986320-6864555012251