HHsearch alignment for GI: 254780787 and conserved domain: COG5257
>COG5257 GCD11 Translation initiation factor 2, gamma subunit (eIF-2gamma; GTPase) [Translation, ribosomal structure and biogenesis].
Probab=99.93 E-value=7.9e-26 Score=194.62 Aligned_cols=202 Identities=27% Similarity=0.388 Sum_probs=151.2
Q ss_pred EEEEEECCCCCHHHHHHHHHH--HHHHHCC-CCCCEECCCEEEEE----------------CC----------CCEEEEE
Q ss_conf 389862368504467778864--2221001-23100012149995----------------17----------8438888
Q gi|254780787|r 385 VVTIMGHVDHGKTSLLDAIRK--ADVAKGE-IGGITQHIGAYQVA----------------YQ----------GKNITFL 435 (884)
Q Consensus 385 vv~v~ghvd~GKt~lld~~r~--~~~~~~e-~ggitq~iga~~~~----------------~~----------~~~~~~i 435 (884)
T Consensus 12 NIG~vGHVdHGKtTlv~AlsGvwT~~hseElkRgitIkLGYAd~~i~kC~~c~~~~~y~~~~~C~~cg~~~~l~R~VSfV 91 (415)
T COG5257 12 NIGMVGHVDHGKTTLTKALSGVWTDRHSEELKRGITIKLGYADAKIYKCPECYRPECYTTEPKCPNCGAETELVRRVSFV 91 (415)
T ss_pred EEEEEEECCCCHHHHEEHHHCEEEECHHHHHHCCCEEEECCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEE
T ss_conf 76234201466241100331334302068875684798402557457577778876623478777789973079999974
Q ss_pred ECCCHHHHHHHHHHHHHCCCCEEEEEECCCCC-CHHHHHHHHHHHHCCCC-EEEECCCCCCCCCCCCHHHHHHHCCCCCC
Q ss_conf 51661578999866642068059999836674-02357778989970994-15612331244332000221000013200
Q gi|254780787|r 436 DTPGHAAFYEMRARGARVTDIAVLVLAADEEI-MPQAIESINHAKAADVS-IIVAINKIDKLGADPQKVRMSLLKHDVFV 513 (884)
Q Consensus 436 DtPGh~~f~~~r~rg~~~~d~~ilvv~~~~g~-~~qt~e~~~~~~~~~~p-~iva~nk~d~~~~~~~~~~~~~~~~~~~~ 513 (884)
T Consensus 92 DaPGHe~LMATMLsGAAlMDgAlLvIaANEpcPQPQT~EHl~AleIigik~iiIvQNKIDlV~~E~AlE--~y~qIk~Fv 169 (415)
T COG5257 92 DAPGHETLMATMLSGAALMDGALLVIAANEPCPQPQTREHLMALEIIGIKNIIIVQNKIDLVSRERALE--NYEQIKEFV 169 (415)
T ss_pred ECCCHHHHHHHHHCCHHHHCCEEEEEECCCCCCCCCHHHHHHHHHHHCCCEEEEEECCCCEECHHHHHH--HHHHHHHHH
T ss_conf 079669999988602344215389995389898973187788776626533999952301115999888--799999986
Q ss_pred C-CCCCCCEEEEEEECCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCEEEEEEE--------ECCCCCCHHHHHHCCHHH
Q ss_conf 0-1234740363110024774112210000233334200034866641677788--------637762000000000000
Q gi|254780787|r 514 E-SMGGDILDVEISAKNNLNLDKLLDAILLQAEMLDLKTSINRKAEGIVVEGKL--------DRGRGPVVTVLVQKGTLS 584 (884)
Q Consensus 514 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~g~~~ 584 (884)
T Consensus 170 kGt~Ae~aPIIPiSA~~~~NIDal~e~i~~~I--ptP~rd~~~~p~m~v~RSFDVNkPGt~~~~L~GGViGGsl~~G~l~ 247 (415)
T COG5257 170 KGTVAENAPIIPISAQHKANIDALIEAIEKYI--PTPERDLDKPPRMYVARSFDVNKPGTPPEELKGGVIGGSLVQGVLR 247 (415)
T ss_pred CCCCCCCCCEEEEHHHHCCCHHHHHHHHHHHC--CCCCCCCCCCCEEEEEEECCCCCCCCCHHHCCCCEECCEEEEEEEE
T ss_conf 26334799544325643058799999999868--9986678999669998640358998997772474322202553685
Q ss_pred CCCCCC
Q ss_conf 000002
Q gi|254780787|r 585 KGNILV 590 (884)
Q Consensus 585 ~~~~~~ 590 (884)
T Consensus 248 vGDEIE 253 (415)
T COG5257 248 VGDEIE 253 (415)
T ss_pred CCCEEE
T ss_conf 387578