HHsearch alignment for GI: 254780787 and conserved domain: KOG0088
>KOG0088 consensus.
Probab=96.89 E-value=0.00099 Score=43.47 Aligned_cols=142 Identities=22% Similarity=0.287 Sum_probs=89.2
Q ss_pred EEEEECCCCCHHHHHHHHHHHHHHHCCCCCCEECCCE---------EEEECCCCEEEEEECCCHHHHHHHHHHHHHCCCC
Q ss_conf 8986236850446777886422210012310001214---------9995178438888516615789998666420680
Q gi|254780787|r 386 VTIMGHVDHGKTSLLDAIRKADVAKGEIGGITQHIGA---------YQVAYQGKNITFLDTPGHAAFYEMRARGARVTDI 456 (884)
Q Consensus 386 v~v~ghvd~GKt~lld~~r~~~~~~~e~ggitq~iga---------~~~~~~~~~~~~iDtPGh~~f~~~r~rg~~~~d~ 456 (884)
T Consensus 16 ~VLLGEGCVGKtSLVLRy~EnkFn-------~kHlsTlQASF~~kk~n~ed~ra~L~IWDTAGQErfHALGPIYYRgSnG 88 (218)
T KOG0088 16 IVLLGEGCVGKTSLVLRYVENKFN-------CKHLSTLQASFQNKKVNVEDCRADLHIWDTAGQERFHALGPIYYRGSNG 88 (218)
T ss_pred EEEECCCCCCHHHHHHHHHHHHCC-------HHHHHHHHHHHHHCCCCCCCCEEEEEEEECCCHHHHHCCCCEEEECCCC
T ss_conf 999748755606899999872323-------0467899988763304621113114321244457652357537707996
Q ss_pred EEEEEECCCCCCHHHHHHHHHHH--HCC--CCEEEECCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCEEEEEEECCCCC
Q ss_conf 59999836674023577789899--709--94156123312443320002210000132000123474036311002477
Q gi|254780787|r 457 AVLVLAADEEIMPQAIESINHAK--AAD--VSIIVAINKIDKLGADPQKVRMSLLKHDVFVESMGGDILDVEISAKNNLN 532 (884)
Q Consensus 457 ~ilvv~~~~g~~~qt~e~~~~~~--~~~--~p~iva~nk~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 532 (884)
T Consensus 89 alLVyDITDrdSFqKVKnWV~Elr~mlGnei~l~IVGNKiDLEeeR--~Vt--~qeAe~YAesv--GA~y~eTSAk~N~G 162 (218)
T KOG0088 89 ALLVYDITDRDSFQKVKNWVLELRTMLGNEIELLIVGNKIDLEEER--QVT--RQEAEAYAESV--GALYMETSAKDNVG 162 (218)
T ss_pred EEEEEECCCHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCHHHHH--HHH--HHHHHHHHHHH--CHHHEECCCCCCCC
T ss_conf 2899864446889999999999998718835999953744678864--202--98899999863--33431111102437
Q ss_pred CCCCCCCH
Q ss_conf 41122100
Q gi|254780787|r 533 LDKLLDAI 540 (884)
Q Consensus 533 ~~~~~~~~ 540 (884)
T Consensus 163 i~elFe~L 170 (218)
T KOG0088 163 ISELFESL 170 (218)
T ss_pred HHHHHHHH
T ss_conf 99999999