HHsearch alignment for GI: 254780787 and conserved domain: KOG1489
>KOG1489 consensus.
Probab=98.56 E-value=5.8e-07 Score=65.57 Aligned_cols=144 Identities=25% Similarity=0.296 Sum_probs=97.5
Q ss_pred EEEEEECCCCCHHHHHHHHHH--HHHHHCCCCCCEECCCEEEEECCCCEEEEEECCCHH-----------HHHHHHHHHH
Q ss_conf 389862368504467778864--222100123100012149995178438888516615-----------7899986664
Q gi|254780787|r 385 VVTIMGHVDHGKTSLLDAIRK--ADVAKGEIGGITQHIGAYQVAYQGKNITFLDTPGHA-----------AFYEMRARGA 451 (884)
Q Consensus 385 vv~v~ghvd~GKt~lld~~r~--~~~~~~e~ggitq~iga~~~~~~~~~~~~iDtPGh~-----------~f~~~r~rg~ 451 (884)
T Consensus 198 dvGLVG~PNAGKSTLL~als~AKpkVa~YaFTTL~P~iG~v~y-ddf~q~tVADiPGiI~GAh~nkGlG~~FLrHiE--- 273 (366)
T KOG1489 198 DVGLVGFPNAGKSTLLNALSRAKPKVAHYAFTTLRPHIGTVNY-DDFSQITVADIPGIIEGAHMNKGLGYKFLRHIE--- 273 (366)
T ss_pred CCCEECCCCCCHHHHHHHHHCCCCCCCCCCEEEECCCCCEEEC-CCCCEEEECCCCCCCCCCCCCCCCCHHHHHHHH---
T ss_conf 5432128988678898776405875455420344464112513-545146850476534454346765489999887---
Q ss_pred HCCCCEEEEEECCCCCCHHHHHHHHHHH---------HCCCCEEEECCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCEE
Q ss_conf 2068059999836674023577789899---------7099415612331244332000221000013200012347403
Q gi|254780787|r 452 RVTDIAVLVLAADEEIMPQAIESINHAK---------AADVSIIVAINKIDKLGADPQKVRMSLLKHDVFVESMGGDILD 522 (884)
Q Consensus 452 ~~~d~~ilvv~~~~g~~~qt~e~~~~~~---------~~~~p~iva~nk~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 522 (884)
T Consensus 274 -R~~~l~fVvD~s~~~~~~p~~~~~lL~~ELe~yek~L~~rp~liVaNKiD~~eae~~~-l~~L~~~lq-------~~~V 344 (366)
T KOG1489 274 -RCKGLLFVVDLSGKQLRNPWQQLQLLIEELELYEKGLADRPALIVANKIDLPEAEKNL-LSSLAKRLQ-------NPHV 344 (366)
T ss_pred -HHCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHH-HHHHHHHCC-------CCCE
T ss_conf -5334899997787555887899999999999986542358538997446736678889-999998737-------9817
Q ss_pred EEEEECCCCCCCCCCCCHH
Q ss_conf 6311002477411221000
Q gi|254780787|r 523 VEISAKNNLNLDKLLDAIL 541 (884)
Q Consensus 523 ~~~~~~~~~~~~~~~~~~~ 541 (884)
T Consensus 345 ~pvsA~~~egl~~ll~~lr 363 (366)
T KOG1489 345 VPVSAKSGEGLEELLNGLR 363 (366)
T ss_pred EEEEECCCCCHHHHHHHHH
T ss_conf 8764004645688998776