HHsearch alignment for GI: 254780787 and conserved domain: KOG1490
>KOG1490 consensus.
Probab=96.63 E-value=0.0033 Score=39.91 Aligned_cols=152 Identities=18% Similarity=0.198 Sum_probs=81.1
Q ss_pred CCCEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCEECCCEEEEECCCCEEEEEECCCHHHH---HHHHHHH------HH
Q ss_conf 53038986236850446777886422210012310001214999517843888851661578---9998666------42
Q gi|254780787|r 382 RPPVVTIMGHVDHGKTSLLDAIRKADVAKGEIGGITQHIGAYQVAYQGKNITFLDTPGHAAF---YEMRARG------AR 452 (884)
Q Consensus 382 R~pvv~v~ghvd~GKt~lld~~r~~~~~~~e~ggitq~iga~~~~~~~~~~~~iDtPGh~~f---~~~r~rg------~~ 452 (884)
T Consensus 167 ~trTlllcG~PNVGKSSf~~~vtradvevqpYaFTTksL~vGH~dykYlrwQViDTPGILD~plEdrN~IEmqsITALAH 246 (620)
T KOG1490 167 NTRTLLVCGYPNVGKSSFNNKVTRADDEVQPYAFTTKLLLVGHLDYKYLRWQVIDTPGILDRPEEDRNIIEMQIITALAH 246 (620)
T ss_pred CCCEEEEECCCCCCCHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHH
T ss_conf 86717985278877376435520155555776655101210020324023440388412476054321799999999987
Q ss_pred CCCCEEEEEECCC----CCCH--HHHHHHHHHHHCCCCEEEECCCCCCCCC-CCCHHHHHHHCCCCCCCCCCCCCEEEEE
Q ss_conf 0680599998366----7402--3577789899709941561233124433-2000221000013200012347403631
Q gi|254780787|r 453 VTDIAVLVLAADE----EIMP--QAIESINHAKAADVSIIVAINKIDKLGA-DPQKVRMSLLKHDVFVESMGGDILDVEI 525 (884)
Q Consensus 453 ~~d~~ilvv~~~~----g~~~--qt~e~~~~~~~~~~p~iva~nk~d~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 525 (884)
T Consensus 247 LraaVLYfmDLSe~CGySva~QvkLfhsIKpLF-aNK~~IlvlNK~D~m~~edL~~~~~~ll~~~~----~~~~v~v~~t 321 (620)
T KOG1490 247 LRSAVLYFMDLSEMCGYSVAAQVKLYHSIKPLF-ANKVTILVLNKIDAMRPEDLDQKNQELLQTII----DDGNVKVVQT 321 (620)
T ss_pred HHHHHEEEEECHHHHCCCHHHHHHHHHHHHHHH-CCCCEEEEEECCCCCCCCCCCHHHHHHHHHHH----HCCCCEEEEE
T ss_conf 565641134322120888999999998767886-28846999520025686566878899999988----6048338873
Q ss_pred EECCCCCCCCCCC
Q ss_conf 1002477411221
Q gi|254780787|r 526 SAKNNLNLDKLLD 538 (884)
Q Consensus 526 ~~~~~~~~~~~~~ 538 (884)
T Consensus 322 S~~~eegVm~Vrt 334 (620)
T KOG1490 322 SCVQEEGVMDVRT 334 (620)
T ss_pred CCCCHHCEEEHHH
T ss_conf 2554002000777