HHsearch alignment for GI: 254780787 and conserved domain: KOG1532
>KOG1532 consensus.
Probab=98.52 E-value=2.1e-08 Score=75.50 Aligned_cols=166 Identities=20% Similarity=0.319 Sum_probs=108.1
Q ss_pred CCCCCCCCEEEEEECCCCCHHHHHHHHHHH---------------------------------------HHHHCCCCCCE
Q ss_conf 001255303898623685044677788642---------------------------------------22100123100
Q gi|254780787|r 377 SDLDIRPPVVTIMGHVDHGKTSLLDAIRKA---------------------------------------DVAKGEIGGIT 417 (884)
Q Consensus 377 ~~~~~R~pvv~v~ghvd~GKt~lld~~r~~---------------------------------------~~~~~e~ggit 417 (884)
T Consensus 13 ~~~~~~p~~ilVvGMAGSGKTTF~QrL~~hl~~~~~ppYviNLDPAv~~vpy~aniDIRDtVkYkEvMkqY~LGPNGgI~ 92 (366)
T KOG1532 13 SGAIQRPVIILVVGMAGSGKTTFMQRLNSHLHAKKTPPYVINLDPAVRNVPYPANIDIRDTVKYKEVMKQYQLGPNGGIV 92 (366)
T ss_pred CCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHCCCCCEEEECCHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCHH
T ss_conf 55556870799994477884139999999986236998088678888548886677566543099999983889986403
Q ss_pred ECCCEEEEE-----------CCCCEEEEEECCCH-HHHHHHHHHHHHCC--------CCEEEEEECCCCCCHHHHH----
Q ss_conf 012149995-----------17843888851661-57899986664206--------8059999836674023577----
Q gi|254780787|r 418 QHIGAYQVA-----------YQGKNITFLDTPGH-AAFYEMRARGARVT--------DIAVLVLAADEEIMPQAIE---- 473 (884)
Q Consensus 418 q~iga~~~~-----------~~~~~~~~iDtPGh-~~f~~~r~rg~~~~--------d~~ilvv~~~~g~~~qt~e---- 473 (884)
T Consensus 93 TsLNLF~tk~dqv~~~iek~~~~~~~~liDTPGQIE~Ft-WSAsGsIIte~lass~ptvv~YvvDt~rs~~p~tFMSNMl 171 (366)
T KOG1532 93 TSLNLFATKFDQVIELIEKRAEEFDYVLIDTPGQIEAFT-WSASGSIITETLASSFPTVVVYVVDTPRSTSPTTFMSNML 171 (366)
T ss_pred HHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCEEEEE-ECCCCCCHHHHHHHCCCEEEEEEECCCCCCCCHHHHHHHH
T ss_conf 358999987899999999742204779974888068998-4278501586676139859999944776788416998899
Q ss_pred -HHHHHHHCCCCEEEECCCCCCCCCCCCHH-HHHH-------------------HCCCCCCCCCCCCCEEEEEEECCCCC
Q ss_conf -78989970994156123312443320002-2100-------------------00132000123474036311002477
Q gi|254780787|r 474 -SINHAKAADVSIIVAINKIDKLGADPQKV-RMSL-------------------LKHDVFVESMGGDILDVEISAKNNLN 532 (884)
Q Consensus 474 -~~~~~~~~~~p~iva~nk~d~~~~~~~~~-~~~~-------------------~~~~~~~~~~~~~~~~~~~~~~~~~~ 532 (884)
T Consensus 172 YAcSilyktklp~ivvfNK~Dv~d~~fa~eWm~DfE~FqeAl~~~~~~y~s~l~~SmSL~leeFY~~lrtv~VSs~tG~G 251 (366)
T KOG1532 172 YACSILYKTKLPFIVVFNKTDVSDSEFALEWMTDFEAFQEALNEAESSYMSNLTRSMSLMLEEFYRSLRTVGVSSVTGEG 251 (366)
T ss_pred HHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCC
T ss_conf 99999986268769997143445618899999999999999976303266776654798999998317557774045786
Q ss_pred CCCCCCCHHCC
Q ss_conf 41122100002
Q gi|254780787|r 533 LDKLLDAILLQ 543 (884)
Q Consensus 533 ~~~~~~~~~~~ 543 (884)
T Consensus 252 ~ddf~~av~~~ 262 (366)
T KOG1532 252 FDDFFTAVDES 262 (366)
T ss_pred HHHHHHHHHHH
T ss_conf 78899999999