HHsearch alignment for GI: 254780787 and conserved domain: KOG2486

Probab=98.62  E-value=4e-07  Score=66.66  Aligned_cols=156  Identities=24%  Similarity=0.283  Sum_probs=108.6

Q ss_pred             CCCCCEEEEEECCCCCHHHHHHHHH-HHHHHHCCC--CCCEECCCEEEEECCCCEEEEEECCC-------H---HHHHHH
Q ss_conf             2553038986236850446777886-422210012--31000121499951784388885166-------1---578999
Q gi|254780787|r  380 DIRPPVVTIMGHVDHGKTSLLDAIR-KADVAKGEI--GGITQHIGAYQVAYQGKNITFLDTPG-------H---AAFYEM  446 (884)
Q Consensus       380 ~~R~pvv~v~ghvd~GKt~lld~~r-~~~~~~~e~--ggitq~iga~~~~~~~~~~~~iDtPG-------h---~~f~~~  446 (884)
T Consensus       133 k~~~pe~~~~g~SNVGKSSLln~~~r~k~~~~t~k~K~g~Tq~in~f~v---~~~~~~vDlPG~~~a~y~~~~~~d~~~~  209 (320)
T KOG2486         133 KDKRPELAFYGRSNVGKSSLLNDLVRVKNIADTSKSKNGKTQAINHFHV---GKSWYEVDLPGYGRAGYGFELPADWDKF  209 (320)
T ss_pred             CCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEC---CCEEEEEECCCCCCCCCCCCCCCHHHHH
T ss_conf             7888526662477622788876543214556403788765113200120---5548998468865456785574147675


Q ss_pred             -----HHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCHHHHHHHCCC-----CCCCCC
Q ss_conf             -----8666420680599998366740235777898997099415612331244332000221000013-----200012
Q gi|254780787|r  447 -----RARGARVTDIAVLVLAADEEIMPQAIESINHAKAADVSIIVAINKIDKLGADPQKVRMSLLKHD-----VFVESM  516 (884)
Q Consensus       447 -----r~rg~~~~d~~ilvv~~~~g~~~qt~e~~~~~~~~~~p~iva~nk~d~~~~~~~~~~~~~~~~~-----~~~~~~  516 (884)
T Consensus       210 t~~Y~leR~nLv~--~FLLvd~sv~i~~~D~~~i~~~ge~~VP~t~vfTK~DK~k~~~~~~kKp~~~i~~~f~~l~~~~f  287 (320)
T KOG2486         210 TKSYLLERENLVR--VFLLVDASVPIQPTDNPEIAWLGENNVPMTSVFTKCDKQKKVKRTGKKPGLNIKINFQGLIRGVF  287 (320)
T ss_pred             HHHHHHHHHHHHE--EEEEEECCCCCCCCCHHHHHHHHHCCCCEEEEEEHHHHHHHCCCCCCCCCCCCEEEHHHCCCCCE
T ss_conf             7888872653311--56663036788998769998875249973886302445553022355754001210200150004


Q ss_pred             CCCCEEEEEEECCCCCCCCCCCCH
Q ss_conf             347403631100247741122100
Q gi|254780787|r  517 GGDILDVEISAKNNLNLDKLLDAI  540 (884)
Q Consensus       517 ~~~~~~~~~~~~~~~~~~~~~~~~  540 (884)
T Consensus       288 ~~~~Pw~~~Ssvt~~Grd~Ll~~i  311 (320)
T KOG2486         288 LVDLPWIYVSSVTSLGRDLLLLHI  311 (320)
T ss_pred             ECCCCCEEEECCCCCCCEEEEEEH
T ss_conf             115870132043425720011016