HHsearch alignment for GI: 254780787 and conserved domain: PRK05306
>PRK05306 infB translation initiation factor IF-2; Validated.
Probab=100.00 E-value=0 Score=1384.19 Aligned_cols=596 Identities=56% Similarity=0.885 Sum_probs=564.7
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHCCEEECCCCCCCHHHHHHHHHHHCCCCCC
Q ss_conf 00000000100001111111111211111000012222221001345553024000234455356677666541011112
Q gi|254780787|r 280 RRRQEKFRRNQQQEKREKISREIVVPETITIQELSQRMSERSADVIKFLMKEGQIMKPGDVIDADLSEIIANEFGNTVKR 359 (884)
Q Consensus 280 rrr~e~~kr~~~~~~~ek~~rev~ipE~itv~ELA~~m~~~~~evik~l~~~G~~~t~nq~lD~etaelva~E~g~ev~~ 359 (884)
T Consensus 243 rrrr~~k~k~~~ekp~e~i~reIkIpEsITV~ELAekM~vKaSevi~~L~~~G~m~t~nq~lD~dtael~~~e~g~~~~~ 322 (839)
T PRK05306 243 KKRKKKKKKQAFQKPTEKIVREVVIPETITVAELANKMAVKAAEVIKKLMKLGVMVTINQSLDQDTAELVAEEFGHKVKL 322 (839)
T ss_pred CCCCCCHHHHHHCCCCCCCCEEEEECCCEEHHHHHHHHCCCHHHHHHHHHHCCCEECCCCCCCHHHHHHHHHHCCCEEEE
T ss_conf 33321000001105666766489968964899999987889999999999778662266777999999999981977999
Q ss_pred CCCHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCEECCCEEEEECC-CCEEEEEECC
Q ss_conf 221012333221012410012553038986236850446777886422210012310001214999517-8438888516
Q gi|254780787|r 360 VLESDIEVGIFDVADSESDLDIRPPVVTIMGHVDHGKTSLLDAIRKADVAKGEIGGITQHIGAYQVAYQ-GKNITFLDTP 438 (884)
Q Consensus 360 ~~~~~~~~~~~~~~~~~~~~~~R~pvv~v~ghvd~GKt~lld~~r~~~~~~~e~ggitq~iga~~~~~~-~~~~~~iDtP 438 (884)
T Consensus 323 ~~~~~~~-----~~~~~~~~~~r~pvvt~mghvdhgkt~lld~~r~~~v~~~e~ggitq~iga~~v~~~~~~~itf~dtp 397 (839)
T PRK05306 323 VSEEDLE-----EGLDEEDLVPRPPVVTIMGHVDHGKTSLLDAIRKTKVAAGEAGGITQHIGAYQVETENGKKITFLDTP 397 (839)
T ss_pred ECCCHHH-----CCCCHHHCCCCCCEEEEECCCCCCHHHHHHHHHCCCCCCCCCCCCCCEEEEEEEEECCCCEEEEECCC
T ss_conf 3620232-----01572105668988988577467731489998628753556787552223499995699879985588
Q ss_pred CHHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCHHHHHHHCCCCCCCCCCC
Q ss_conf 61578999866642068059999836674023577789899709941561233124433200022100001320001234
Q gi|254780787|r 439 GHAAFYEMRARGARVTDIAVLVLAADEEIMPQAIESINHAKAADVSIIVAINKIDKLGADPQKVRMSLLKHDVFVESMGG 518 (884)
Q Consensus 439 Gh~~f~~~r~rg~~~~d~~ilvv~~~~g~~~qt~e~~~~~~~~~~p~iva~nk~d~~~~~~~~~~~~~~~~~~~~~~~~~ 518 (884)
T Consensus 398 gh~af~~mr~rga~~tdi~ilvvaaddgv~pqt~eai~~~~~a~vp~ivaink~d~~~a~~~~v~~~l~~~~~~~e~~gg 477 (839)
T PRK05306 398 GHEAFTAMRARGAQVTDIVVLVVAADDGVMPQTIEAINHAKAAGVPIIVAINKIDKPGANPDRVKQELTEYGLVPEEWGG 477 (839)
T ss_pred CHHHHHHHHHCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCCHHHHHHHHHHCCCCHHHCCC
T ss_conf 55889999863576543699999777775677899999999749988999740467889889999999984986454289
Q ss_pred CCEEEEEEECCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCHHHHHHCCHHHCCCCCCCCCCCCCC
Q ss_conf 74036311002477411221000023333420003486664167778863776200000000000000000256655542
Q gi|254780787|r 519 DILDVEISAKNNLNLDKLLDAILLQAEMLDLKTSINRKAEGIVVEGKLDRGRGPVVTVLVQKGTLSKGNILVVGDQWGKI 598 (884)
Q Consensus 519 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~v 598 (884)
T Consensus 478 ~~~~v~~sa~~~~~~~~l~e~i~l~ae~~~l~a~~~~~a~g~vie~~~~~~~g~v~t~lv~~gtl~~gd~~v~g~~~g~v 557 (839)
T PRK05306 478 DTIFVPVSAKTGEGIDELLEAILLQAEVLELKANPDRPARGVVIEAKLDKGRGPVATVLVQNGTLKVGDIVVAGTTYGRV 557 (839)
T ss_pred CEEEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEEEECCCCCCEEEEEEECCEECCCCEEEEECCCCCC
T ss_conf 44899815157887899999999876652044799986179999877527875058999842713259989981020551
Q ss_pred EECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
Q ss_conf 00014665322100001222111123475555404312420366899999999999999877664456578888520001
Q gi|254780787|r 599 RALFNDRGQGISKAVPSMPIEVLGLQGMPMAGDKFGVVDSESRAREIAQYRQRVTRNKSMARRLGSHSALEKLVKNANIS 678 (884)
Q Consensus 599 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 678 (884)
T Consensus 558 r~m~~~~g~~~~~a~Ps~pv~i~G~~~~P~aGd~~~~~~~e~~a~~~~~~r~~~~~~~~~~~~~--~~~l~~~~~-~~~~ 634 (839)
T PRK05306 558 RAMVDDNGKRVKEAGPSTPVEILGLSGVPQAGDEFVVVEDEKKAREIAEYRQEKAREKKLARKQ--RVSLENLFA-QMKE 634 (839)
T ss_pred EEEECCCCCCCCCCCCCCCEEEECCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHH--HCCHHHHHH-HHHC
T ss_conf 0158899989871489877796056789988887785278899999999999999999875531--146988986-6522
Q ss_pred CCHHHHHHHHHHHCCCCHHHHHHHHHCCCCCEEEEEEEECCCCCCCHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHCCC
Q ss_conf 23023344433310231234555421157653565788512685757788764325987999638999899999998398
Q gi|254780787|r 679 SKMKEFPVIIKGDVQGSVEAIVDSLGALKNSEVCLSIVHSSVGAINETDVSLAKASGAVIFGFNVRASSQARVLAIKDEI 758 (884)
Q Consensus 679 ~~~~~~~~~ik~d~~gs~eal~~~l~~~~~~ev~i~v~~~~VG~v~~~DV~~A~~~~a~Il~FnVkv~~~a~~~A~~~gV 758 (884)
T Consensus 635 ~~~k~l~~iiK~Dv~Gs~eAi~~~l~~~~~~~v~~~ii~~~vG~itesDv~lA~as~a~iigFnv~~~~~~~~~a~~~~v 714 (839)
T PRK05306 635 GEVKELNLILKADVQGSVEALSDSLEKLSTDEVKVRIIHSGVGAITESDVTLAAASNAIIIGFNVRADAKARKLAEQEGV 714 (839)
T ss_pred CCCEEEEEEEECCCCCHHHHHHHHHHHCCCCCEEEEEEECCCCCCCHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHCCC
T ss_conf 67427878985276543999999998368873789999516777768789889854988999538889899999998398
Q ss_pred EEEEEEHHHHHHHHHHHHHHHHCCCEEEEEEEEEEEEEEEEECCCCCCEEEEEEEEEEEECCCEEEEEECCEEEEEEEEH
Q ss_conf 59975026789999999996306940478888789997887338987078999852178469807996699899822625
Q gi|254780787|r 759 KILYYKIIYDLLDSIKDSMSELLSPEIRETFLGNAEVLEVFAVTKLGNVAGCKVSEGKVERGSGVRLIRNSTVIYEGKLK 838 (884)
Q Consensus 759 ~I~~~~IIY~L~d~~~~~~~~~l~~~~~~~~~g~a~v~~vF~~~k~~~i~G~~V~~G~i~~~~~~~v~r~~~~i~~g~i~ 838 (884)
T Consensus 715 ~i~~y~iIY~~id~v~~~~~g~l~p~~~e~~~G~a~v~~~f~~~k~g~iagc~v~~g~i~~~~~~r~~r~~~~~~~g~~~ 794 (839)
T PRK05306 715 DIRYYSIIYDLIDDVKAAMSGMLEPEYEEEIIGQAEVREVFKVSKVGTIAGCMVTEGKVKRNAKVRVLRDGVVIYEGELE 794 (839)
T ss_pred EEEEECHHHHHHHHHHHHHHCCCCCCEEEEEEEEEEEEEEEECCCCCEEEEEEEEECEEECCCCEEEEECCEEEEEEEEH
T ss_conf 18992568879999999984489973278997999974579758873688899871889649927998799899962636
Q ss_pred HHHHCCHHHHHHHCCCEEEEEEECCEEEEECCEEEEEEEEEEEEC
Q ss_conf 766446006687279766999728411005898999889998514
Q gi|254780787|r 839 TLKRFKDEVSEVHAGQDCGMAFEKYDNIQAGDMIECFSIEHIKRS 883 (884)
Q Consensus 839 sl~~~k~~v~ev~~g~ecgi~~~~~~~~~~gD~i~~~~~~~~~~~ 883 (884)
T Consensus 795 sl~~~k~~v~ev~~g~ecgi~~~~~~~~~~gd~ie~~~~~~~~~~ 839 (839)
T PRK05306 795 SLKRFKDDVKEVRAGYECGIGLENYNDIKEGDIIEAFEMVEVKRT 839 (839)
T ss_pred HHHHHHHCCCHHCCCCCCEEEECCCCCCCCCCEEEEEEEEEECCC
T ss_conf 641102031232389425267337357766988999899994289