HHsearch alignment for GI: 254780787 and conserved domain: PRK09435
>PRK09435 arginine/ornithine transport system ATPase; Provisional.
Probab=97.49 E-value=0.001 Score=43.41 Aligned_cols=157 Identities=19% Similarity=0.194 Sum_probs=96.8
Q ss_pred CCCCEEEEEECCCCCHHHHHHHHHHHHHHHCCC-------------CC-C----------EECCCEEEEEC---------
Q ss_conf 553038986236850446777886422210012-------------31-0----------00121499951---------
Q gi|254780787|r 381 IRPPVVTIMGHVDHGKTSLLDAIRKADVAKGEI-------------GG-I----------TQHIGAYQVAY--------- 427 (884)
Q Consensus 381 ~R~pvv~v~ghvd~GKt~lld~~r~~~~~~~e~-------------gg-i----------tq~iga~~~~~--------- 427 (884)
T Consensus 47 g~a~~iGiTG~pG~GKStli~~l~~~~~~~g~~v~vlavDPsS~~sgGaiLGDr~Rm~~~~~~~~~fiRs~~srg~lgg~ 126 (325)
T PRK09435 47 GNALRIGITGVPGVGKSTFIEALGMHLIEQGHKVAVLAVDPSSTRTGGSILGDKTRMERLSRHPNAFIRPSPSSGTLGGV 126 (325)
T ss_pred CCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHCCCCCEEEEECCCCCCCCCC
T ss_conf 98259974279998688999999999996798589999789999888610103888876147998488406778886773
Q ss_pred -------------CCCEEEEEECCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCCEEEECCCCCC
Q ss_conf -------------7843888851661578999866642068059999836674023577789899709941561233124
Q gi|254780787|r 428 -------------QGKNITFLDTPGHAAFYEMRARGARVTDIAVLVLAADEEIMPQAIESINHAKAADVSIIVAINKIDK 494 (884)
Q Consensus 428 -------------~~~~~~~iDtPGh~~f~~~r~rg~~~~d~~ilvv~~~~g~~~qt~e~~~~~~~~~~p~iva~nk~d~ 494 (884)
T Consensus 127 ~~~~~~~~~~~~a~g~d~i~iETvGvGQ~e---~~v~~~~d~~~~~~~p~~GD~~Q~~K~G----ImEiaDi~vVNKaDg 199 (325)
T PRK09435 127 ARKTRETMLLCEAAGFDVILVETVGVGQSE---TAVAGMVDFFLLLQLPGAGDELQGIKKG----IMELADLIVINKADG 199 (325)
T ss_pred CHHHHHHHHHHHHCCCCEEEEEECCCCHHH---HHHHHHCCEEEEEECCCCCCHHHHHHHH----HHHHCCEEEEECCCC
T ss_conf 354999999999779998999706777148---8998742668888358876088998865----775042689977675
Q ss_pred CCCCC-CHHHHHHHCCCC-C-CCCCCCCCEEEEEEECCCCCCCCCCCCHHCCC
Q ss_conf 43320-002210000132-0-00123474036311002477411221000023
Q gi|254780787|r 495 LGADP-QKVRMSLLKHDV-F-VESMGGDILDVEISAKNNLNLDKLLDAILLQA 544 (884)
Q Consensus 495 ~~~~~-~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 544 (884)
T Consensus 200 d~~~~A~~t~~e~~~aL~l~~~~~~~W~ppVl~~SA~~g~GI~eL~~~I~~h~ 252 (325)
T PRK09435 200 DNHTAARRAAAEYRSALRLLRPKDPGWQPPVLTCSALEGEGIDELWQAIEDHR 252 (325)
T ss_pred CCHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHH
T ss_conf 56589999999999998607887899999989998158998799999999999