HHsearch alignment for GI: 254780787 and conserved domain: PRK11058
>PRK11058 putative GTPase HflX; Provisional.
Probab=99.21 E-value=2.8e-10 Score=88.24 Aligned_cols=151 Identities=19% Similarity=0.221 Sum_probs=100.6
Q ss_pred CCCCEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCEECCCEEEEEC-CCCEEEEEECCCH---------HHHHHHHHHH
Q ss_conf 55303898623685044677788642221001231000121499951-7843888851661---------5789998666
Q gi|254780787|r 381 IRPPVVTIMGHVDHGKTSLLDAIRKADVAKGEIGGITQHIGAYQVAY-QGKNITFLDTPGH---------AAFYEMRARG 450 (884)
Q Consensus 381 ~R~pvv~v~ghvd~GKt~lld~~r~~~~~~~e~ggitq~iga~~~~~-~~~~~~~iDtPGh---------~~f~~~r~rg 450 (884)
T Consensus 195 ~~~~~ValVGYTNAGKSTL~n~Lt~~~v~~~d~LFATLD~t~R~~~l~~~~~~lltDTVGFI~~LP~~LveAF~sTLeE- 273 (426)
T PRK11058 195 ADVPTVSLVGYTNAGKSTLFNRITEARVYAADQLFATLDPTLRRIDVADVGETVLADTVGFIRHLPHDLVAAFKATLQE- 273 (426)
T ss_pred CCCCEEEEECCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEECCCCCEEEEECCCHHHHHCCHHHHHHHHHHHHH-
T ss_conf 6997699973577778999877752887632545014786202678699986999715066651989999999999999-
Q ss_pred HHCCCCEEEEEECCCCC-CHHHHHHHHHHHHC---CCCEEEECCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCEEEEEE
Q ss_conf 42068059999836674-02357778989970---994156123312443320002210000132000123474036311
Q gi|254780787|r 451 ARVTDIAVLVLAADEEI-MPQAIESINHAKAA---DVSIIVAINKIDKLGADPQKVRMSLLKHDVFVESMGGDILDVEIS 526 (884)
Q Consensus 451 ~~~~d~~ilvv~~~~g~-~~qt~e~~~~~~~~---~~p~iva~nk~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 526 (884)
T Consensus 274 v~~ADlLLhVvD~S~p~~~~q~~~v~~vL~elg~~~~p~i~V~NKiD~~~~~~~~~~~----------~~~~~p~~V~iS 343 (426)
T PRK11058 274 TRQATLLLHVIDAADVRVQENIEAVNTVLEEIDAHEIPTLLVMNKIDMLDDFEPRIDR----------DEENKPIRVWLS 343 (426)
T ss_pred HHCCCEEEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCHHHHHHH----------HHCCCCCEEEEE
T ss_conf 9639889999849993799999999999997599999779999770238964455666----------533998779997
Q ss_pred ECCCCCCCCCCCCHHC
Q ss_conf 0024774112210000
Q gi|254780787|r 527 AKNNLNLDKLLDAILL 542 (884)
Q Consensus 527 ~~~~~~~~~~~~~~~~ 542 (884)
T Consensus 344 A~tg~Gi~~L~~~I~~ 359 (426)
T PRK11058 344 AQTGAGIPLLFQALTE 359 (426)
T ss_pred CCCCCCHHHHHHHHHH
T ss_conf 8999899999999998