HHsearch alignment for GI: 254780787 and conserved domain: PRK11889

Probab=90.91  E-value=0.77  Score=23.72  Aligned_cols=142  Identities=18%  Similarity=0.191  Sum_probs=76.1

Q ss_pred             CCEEEEEECCCCCHHHHHHHHHHH-HHHHCCCCCCEE---CCCEEE----------EEC-------------------CC
Q ss_conf             303898623685044677788642-221001231000---121499----------951-------------------78
Q gi|254780787|r  383 PPVVTIMGHVDHGKTSLLDAIRKA-DVAKGEIGGITQ---HIGAYQ----------VAY-------------------QG  429 (884)
Q Consensus       383 ~pvv~v~ghvd~GKt~lld~~r~~-~~~~~e~ggitq---~iga~~----------~~~-------------------~~  429 (884)
T Consensus       241 ~q~IALVGPTGVGKTTTIAKLAArf~~~~KkVALITtDTYRIGAVEQLKTYAeIMgVPV~VV~dp~eL~~AL~~lkdka~  320 (436)
T PRK11889        241 VQTIALIGPTGVGKTTTLAKMAWQFHGKKKTVGFITTDHSRIGTVQQLQDYVKTIGFEVIAVRDEAAMTRALTYFKEEAR  320 (436)
T ss_pred             CEEEEEECCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHHCCCEEEECCHHHHHHHHHHHHHCCC
T ss_conf             71799989999888999999999986169808999806634769999999999849943996888999999998763368


Q ss_pred             CEEEEEECCCHHHHHHHH------HHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCHHH
Q ss_conf             438888516615789998------66642068059999836674023577789899709941561233124433200022
Q gi|254780787|r  430 KNITFLDTPGHAAFYEMR------ARGARVTDIAVLVLAADEEIMPQAIESINHAKAADVSIIVAINKIDKLGADPQKVR  503 (884)
Q Consensus       430 ~~~~~iDtPGh~~f~~~r------~rg~~~~d~~ilvv~~~~g~~~qt~e~~~~~~~~~~p~iva~nk~d~~~~~~~~~~  503 (884)
T Consensus       321 ~DLILIDTAGRS~RD~~~I~EL~~~l~~~~p~ev~LVLSATTK--~~DL~eIi~rF~~l~idglIfTKLDET~SlG~ILN  398 (436)
T PRK11889        321 VDYILIDTAGKNYRASETVEEMIETMGQVEPDYICLTLSASMK--SKDMIEIITNFKDIHIDGIVFTKFDETASSGELLK  398 (436)
T ss_pred             CCEEEEECCCCCCCCHHHHHHHHHHHHHCCCCEEEEEEECCCC--HHHHHHHHHHHCCCCCCEEEEEECCCCCCCHHHHH
T ss_conf             8889992989884689999999999851277716999978899--89999999972579988289971325687037888


Q ss_pred             HHHHCCCCCCCCCCCCCEEEEEEEC-CCCCCCCCCCC
Q ss_conf             1000013200012347403631100-24774112210
Q gi|254780787|r  504 MSLLKHDVFVESMGGDILDVEISAK-NNLNLDKLLDA  539 (884)
Q Consensus       504 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~  539 (884)
T Consensus       399 v~~~-------------s~LPIsYvTdGQ~VPEDIev  422 (436)
T PRK11889        399 IPAV-------------SSAPIVLMTDGQDVKKNIHI  422 (436)
T ss_pred             HHHH-------------HCCCEEEECCCCCCCCCHHH
T ss_conf             9988-------------39987997899858753000