HHsearch alignment for GI: 254780787 and conserved domain: PRK13768

Probab=97.76  E-value=5.7e-05  Score=51.97  Aligned_cols=154  Identities=19%  Similarity=0.229  Sum_probs=89.1

Q ss_pred             EEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCEECCC--EEEEEC-----------------------------------
Q ss_conf             3898623685044677788642221001231000121--499951-----------------------------------
Q gi|254780787|r  385 VVTIMGHVDHGKTSLLDAIRKADVAKGEIGGITQHIG--AYQVAY-----------------------------------  427 (884)
Q Consensus       385 vv~v~ghvd~GKt~lld~~r~~~~~~~e~ggitq~ig--a~~~~~-----------------------------------  427 (884)
T Consensus         4 ~~~ViGpaGSGKsT~~~~l~~~l~~~~r~-~~vvNLDPA~e~~pY~~~iDIRd~i~~~dVM~~~~LGPNGali~~~e~l~   82 (253)
T PRK13768          4 IVFFLGTAGSGKTTLVGALSDWLEEQGYD-VAIVNLDPAVEYLPYKPDIDVREYVSAREIMRKYGLGPNGALIASVDLLL   82 (253)
T ss_pred             EEEEECCCCCCHHHHHHHHHHHHHHCCCC-EEEEECCCCCCCCCCCCCCCHHHHCCHHHHHHHHCCCCCHHHHHHHHHHH
T ss_conf             89998999998899999999999976997-59997898665899998863786178999998819896468999999999


Q ss_pred             ------------CCCEEEEEECCCH------H-HHHHHHH---HHHHCCCCEEEEEECCCCCCHHH-----HHHHHHHHH
Q ss_conf             ------------7843888851661------5-7899986---66420680599998366740235-----777898997
Q gi|254780787|r  428 ------------QGKNITFLDTPGH------A-AFYEMRA---RGARVTDIAVLVLAADEEIMPQA-----IESINHAKA  480 (884)
Q Consensus       428 ------------~~~~~~~iDtPGh------~-~f~~~r~---rg~~~~d~~ilvv~~~~g~~~qt-----~e~~~~~~~  480 (884)
T Consensus        83 ~~~d~l~~~i~~~~~dY~i~D~PGQiElft~~~~~~~i~~~L~~~~~~--~~v~l~D~~~~~~~~~fiS~~L~a~s~m~~  160 (253)
T PRK13768         83 TKAEEIKEEIERLDADYVLVDTPGQMELFAFRESGRYLVEKLSSGSKS--LSVYLIDAVLAKDPSDFVSLLLLALSVQLR  160 (253)
T ss_pred             HHHHHHHHHHHHCCCCEEEEECCCCEEEEECCHHHHHHHHHHHCCCCE--EEEEEECHHHHCCHHHHHHHHHHHHHHHHH
T ss_conf             989999999851588759982687443222340799999998636862--899984505637887999999999999997


Q ss_pred             CCCCEEEECCCCCCCCC--------CCCHHH---HHH-----------HCCCCCCCCCCCCCEEEEEEECCCCCCCCCCC
Q ss_conf             09941561233124433--------200022---100-----------00132000123474036311002477411221
Q gi|254780787|r  481 ADVSIIVAINKIDKLGA--------DPQKVR---MSL-----------LKHDVFVESMGGDILDVEISAKNNLNLDKLLD  538 (884)
Q Consensus       481 ~~~p~iva~nk~d~~~~--------~~~~~~---~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  538 (884)
T Consensus       161 l~lP~inVlsK~Dll~~~~~~~i~~~~~D~~~l~~~l~~~~~~~~~l~~~l~~~l~e~~~~v~~ipvS~~~~eg~~~l~~  240 (253)
T PRK13768        161 LGLPQIPVLNKIDLLSEEELERIRKWLEDPETLLEELKLDKGVQGDLAEELLSALEESGIPVRVIPVSAKTGEGFEELYA  240 (253)
T ss_pred             CCCCEEEEEEHHHCCCHHHHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHH
T ss_conf             39997998676862783779999998629999999985061158999999999999846666527756898787999999


Q ss_pred             CHH
Q ss_conf             000
Q gi|254780787|r  539 AIL  541 (884)
Q Consensus       539 ~~~  541 (884)
T Consensus       241 ~I~  243 (253)
T PRK13768        241 LLQ  243 (253)
T ss_pred             HHH
T ss_conf             999