HHsearch alignment for GI: 254780787 and conserved domain: PTZ00132
>PTZ00132 GTP-binding nuclear protein; Provisional.
Probab=99.14 E-value=3.5e-10 Score=87.61 Aligned_cols=140 Identities=18% Similarity=0.263 Sum_probs=96.6
Q ss_pred EEEEECCCCCHHHHHHHHHHHHHHHCCCCCCEECCCEE----EEECCC--CEEEEEECCCHHHHHHHHHHHHHCCCCEEE
Q ss_conf 89862368504467778864222100123100012149----995178--438888516615789998666420680599
Q gi|254780787|r 386 VTIMGHVDHGKTSLLDAIRKADVAKGEIGGITQHIGAY----QVAYQG--KNITFLDTPGHAAFYEMRARGARVTDIAVL 459 (884)
Q Consensus 386 v~v~ghvd~GKt~lld~~r~~~~~~~e~ggitq~iga~----~~~~~~--~~~~~iDtPGh~~f~~~r~rg~~~~d~~il 459 (884)
T Consensus 9 IvllGd~~VGKTsLi~r~~~~~F~~~----y~pTig~d~~~~~~~~~~~~i~l~IwDTaGqe~f~sl~~~yyr~a~~~il 84 (209)
T PTZ00132 9 LILVGDGGVGKTTFVKRHLTGEFEKK----YIATLGVEVHPLKFYTNRGKICFNVWDTAGQEKFGGLRDGYYIKGQCAII 84 (209)
T ss_pred EEEECCCCCCHHHHHHHHHHCCCCCC----CCCCCCEEEEEEEEEECCEEEEEEEEECCCCCCCCCCCCHHHCCCCEEEE
T ss_conf 99999999678999999971996998----77760279899999999999999999899974455665144248988999
Q ss_pred EEECCCCCCHHHHHHHH----HHHH--CCCCEEEECCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCEEEEEEECCCCCC
Q ss_conf 99836674023577789----8997--09941561233124433200022100001320001234740363110024774
Q gi|254780787|r 460 VLAADEEIMPQAIESIN----HAKA--ADVSIIVAINKIDKLGADPQKVRMSLLKHDVFVESMGGDILDVEISAKNNLNL 533 (884)
Q Consensus 460 vv~~~~g~~~qt~e~~~----~~~~--~~~p~iva~nk~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 533 (884)
T Consensus 85 VfDit~---~~SF~~l~~W~~ei~~~~~~ipivLVGNK~DL~~---r~V~~~~~---~~a~~~--~~~f~EtSAKtg~NV 153 (209)
T PTZ00132 85 MFDVTS---RITYKNVPNWHRDITRVCENIPIVLVGNKVDVKD---RQVKAKQI---TFHRKK--NLQYYDISAKSNYNF 153 (209)
T ss_pred EECCCC---HHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCC---CCCCHHHH---HHHHHC--CCEEEEEECCCCCCH
T ss_conf 843788---7899999999999998689987899976232241---35579999---999987--998999726899397
Q ss_pred CCCCCCH
Q ss_conf 1122100
Q gi|254780787|r 534 DKLLDAI 540 (884)
Q Consensus 534 ~~~~~~~ 540 (884)
T Consensus 154 ~e~F~~L 160 (209)
T PTZ00132 154 EKPFLWL 160 (209)
T ss_pred HHHHHHH
T ss_conf 9999999