HHsearch alignment for GI: 254780787 and conserved domain: TIGR00750
>TIGR00750 lao LAO/AO transport system ATPase; InterPro: IPR005129 Bacterial periplasmic transport systems require the function of a specific substrate-binding protein, located in the periplasm, and several cytoplasmic membrane transport components. In Escherichia coli K-12, the arginine-ornithine transport system requires an arginine-ornithine-binding protein and the lysine-arginine-ornithine (LAO) transport system includes a LAO-binding protein. Both periplasmic proteins can be phosphorylated by a single kinase, ArgK resulting in reduced levels of transport activity of the periplasmic transport systems that include each of the binding proteins. The ArgK protein acts as an ATPase enzyme and as a kinase..
Probab=94.26 E-value=0.1 Score=29.67 Aligned_cols=157 Identities=22% Similarity=0.254 Sum_probs=93.9
Q ss_pred CCCCEEEEEECCCCCHHHHHHHHHHH------HH--------------------------------------------HH
Q ss_conf 55303898623685044677788642------22--------------------------------------------10
Q gi|254780787|r 381 IRPPVVTIMGHVDHGKTSLLDAIRKA------DV--------------------------------------------AK 410 (884)
Q Consensus 381 ~R~pvv~v~ghvd~GKt~lld~~r~~------~~--------------------------------------------~~ 410 (884)
T Consensus 36 GnA~~vG~TG~PGaGKSTl~~~l~~~lrRrG~~VaViAvDP~SPfTGGsiLGDr~Rm~~~asrkqlW~dPg~FIRs~ptr 115 (333)
T TIGR00750 36 GNAHVVGITGVPGAGKSTLVEKLIMELRRRGLKVAVIAVDPSSPFTGGSILGDRLRMQRLASRKQLWTDPGVFIRSMPTR 115 (333)
T ss_pred CCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCC
T ss_conf 79078766468888577799999899976597689998879759755145456887754422223322898567677666
Q ss_pred CCCCCCEECCCEEEE--ECCCCEEEEEECCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCCEEEE
Q ss_conf 012310001214999--517843888851661578999866642068059999836674023577789899709941561
Q gi|254780787|r 411 GEIGGITQHIGAYQV--AYQGKNITFLDTPGHAAFYEMRARGARVTDIAVLVLAADEEIMPQAIESINHAKAADVSIIVA 488 (884)
Q Consensus 411 ~e~ggitq~iga~~~--~~~~~~~~~iDtPGh~~f~~~r~rg~~~~d~~ilvv~~~~g~~~qt~e~~~~~~~~~~p~iva 488 (884)
T Consensus 116 G~lGGls~at~~~~~lldA~G~DVI~vETVGVGQSEVd---i~~~aDT~v~v~~pg~GDd~Q~iKa----G~mEiaDI~V 188 (333)
T TIGR00750 116 GSLGGLSKATRELVKLLDAAGYDVILVETVGVGQSEVD---IINMADTFVVVTIPGTGDDVQGIKA----GVMEIADIYV 188 (333)
T ss_pred CCHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCHHHHH---HHHHHCEEEEEECCCCCCHHHHHHH----HHHEEEEEEE
T ss_conf 75257879999999999863898799984157524878---8734150589854887834666654----4302324878
Q ss_pred CCCCCCCCCCC-CHHHH-HH--------------------HCCCCCCC-CCCCCCEEEEEEECCCCCCCCCCCCHHCCC
Q ss_conf 23312443320-00221-00--------------------00132000-123474036311002477411221000023
Q gi|254780787|r 489 INKIDKLGADP-QKVRM-SL--------------------LKHDVFVE-SMGGDILDVEISAKNNLNLDKLLDAILLQA 544 (884)
Q Consensus 489 ~nk~d~~~~~~-~~~~~-~~--------------------~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 544 (884)
T Consensus 189 VNKaD~~~a~~v~~~a~~~l~l~~esvqmlsqmthadearvq~G~~~~r~~gW~Ppv~~tsA~~G~Gi~EL~daI~eH~ 267 (333)
T TIGR00750 189 VNKADGEGAEEVKTLARLMLALDLESVQMLSQMTHADEARVQKGEIYRREKGWRPPVLKTSAVEGRGIDELWDAIEEHK 267 (333)
T ss_pred EECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHCCCCCCEEEEECCCCCCCHHHHHHHHHHH
T ss_conf 8168876658999999998888888999998653333444302655110105899638873356887167899999999