HHsearch alignment for GI: 254780787 and conserved domain: TIGR01393
>TIGR01393 lepA GTP-binding protein LepA; InterPro: IPR006297 LepA (GUF1 in Saccaromyces) is a GTP-binding membrane protein related to EF-G and EF-Tu. Two types of phylogenetic tree, rooted by other GTP-binding proteins, suggest that eukaryotic homologs (including GUF1 of yeast) originated within the bacterial LepA family. The function of the proteins in this family are unknown. ; GO: 0005525 GTP binding.
Probab=95.11 E-value=0.15 Score=28.53 Aligned_cols=101 Identities=18% Similarity=0.329 Sum_probs=58.7
Q ss_pred HHHHHHHHHHHHHCCCEEEEE-EEEEEEEE-EEEECCCCCCEEEEEEEEEEEECCCEEEEEECCEEEEEEEEHHHHHCC-
Q ss_conf 899999999963069404788-88789997-887338987078999852178469807996699899822625766446-
Q gi|254780787|r 768 DLLDSIKDSMSELLSPEIRET-FLGNAEVL-EVFAVTKLGNVAGCKVSEGKVERGSGVRLIRNSTVIYEGKLKTLKRFK- 844 (884)
Q Consensus 768 ~L~d~~~~~~~~~l~~~~~~~-~~g~a~v~-~vF~~~k~~~i~G~~V~~G~i~~~~~~~v~r~~~~i~~g~i~sl~~~k- 844 (884)
T Consensus 171 e~LEaI---v~~vPpP~Gd~~DapLkALIFDS~YD~Yr-GVv~~vRv~~G~ik~gD~I~~Mstgk~y~V~evG~~~P~~~ 246 (598)
T TIGR01393 171 EILEAI---VKRVPPPKGDPDDAPLKALIFDSHYDNYR-GVVVLVRVFEGTIKKGDKIRFMSTGKEYEVDEVGVFTPKLE 246 (598)
T ss_pred HHHHHH---HHCCCCCCCCCCCCCCEEEEEEEEECCCC-EEEEEEEEEECEECCCCEEEEEECCCEEEEEEEEEECCCCC
T ss_conf 998897---10181001138886632278843543865-08999999526864698899953487666755003434520
Q ss_pred HHHHHHHCCCEEEEE---EECCEEEEECCEEE
Q ss_conf 006687279766999---72841100589899
Q gi|254780787|r 845 DEVSEVHAGQDCGMA---FEKYDNIQAGDMIE 873 (884)
Q Consensus 845 ~~v~ev~~g~ecgi~---~~~~~~~~~gD~i~ 873 (884)
T Consensus 247 ~~~~~L~aG-eVGy~~AgIK~v~D~~VGDTiT 277 (598)
T TIGR01393 247 VKTQELSAG-EVGYIIAGIKDVSDVKVGDTIT 277 (598)
T ss_pred CCCCCEECC-CEEEEEEEEEECCCEECCCEEE
T ss_conf 146620016-3059998653104112054452