HHsearch alignment for GI: 254780787 and conserved domain: cd01895
>cd01895 EngA2 EngA2 subfamily. This CD represents the second GTPase domain of EngA and its orthologs, which are composed of two adjacent GTPase domains. Since the sequences of the two domains are more similar to each other than to other GTPases, it is likely that an ancient gene duplication, rather than a fusion of evolutionarily distinct GTPases, gave rise to this family. Although the exact function of these proteins has not been elucidated, studies have revealed that the E. coli EngA homolog, Der, and Neisseria gonorrhoeae EngA are essential for cell viability. A recent report suggests that E. coli Der functions in ribosome assembly and stability.
Probab=99.85 E-value=1.6e-20 Score=158.25 Aligned_cols=158 Identities=26% Similarity=0.347 Sum_probs=120.4
Q ss_pred CCEEEEEECCCCCHHHHHHHHHHHHHH-HCCCCCCEECCCEEEEECCCCEEEEEECCC----------HHHHHHHHH-HH
Q ss_conf 303898623685044677788642221-001231000121499951784388885166----------157899986-66
Q gi|254780787|r 383 PPVVTIMGHVDHGKTSLLDAIRKADVA-KGEIGGITQHIGAYQVAYQGKNITFLDTPG----------HAAFYEMRA-RG 450 (884)
Q Consensus 383 ~pvv~v~ghvd~GKt~lld~~r~~~~~-~~e~ggitq~iga~~~~~~~~~~~~iDtPG----------h~~f~~~r~-rg 450 (884)
T Consensus 2 ~~~V~ivG~pN~GKSTL~N~l~g~~~~~vs~~pgtTr~~~~~~~~~~~~~~~~vDtpGi~~~~~~~~~~e~~~~~~~~~~ 81 (174)
T cd01895 2 PIRIAIIGRPNVGKSSLVNALLGEERVIVSDIAGTTRDSIDVPFEYDGKKYTLIDTAGIRRKGKVEEGIEKYSVLRTLKA 81 (174)
T ss_pred CCEEEEECCCCCCHHHHHHHHHCCCCEEECCCCCCEEECCEEEEEECCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHH
T ss_conf 98999998999989999999838984443499991573328999999988999857884213442106889999999999
Q ss_pred HHCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCEEEEEEECCC
Q ss_conf 42068059999836674023577789899709941561233124433200022100001320001234740363110024
Q gi|254780787|r 451 ARVTDIAVLVLAADEEIMPQAIESINHAKAADVSIIVAINKIDKLGADPQKVRMSLLKHDVFVESMGGDILDVEISAKNN 530 (884)
Q Consensus 451 ~~~~d~~ilvv~~~~g~~~qt~e~~~~~~~~~~p~iva~nk~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 530 (884)
T Consensus 82 i~~~dvil~viDa~~~~~~~d~~i~~~l~~~~~p~iiv~NK~Dli~~~~~~~~-~~~~~~~~~~~~~~~~~ii~iSA~~g 160 (174)
T cd01895 82 IERADVVLLVIDATEGITEQDLRIAGLILEEGKALVIVVNKWDLVEKDSKTMK-EFKKEIRRKLPFLDYAPIVFISALTG 160 (174)
T ss_pred HHHCCCEEEEEECCCCCCHHHHHHHHHHHHCCCCEEEEEECEECCCCCHHHHH-HHHHHHHHHHCCCCCCCEEEEECCCC
T ss_conf 98428658997589899889999999999859986999856752676477899-99999998734168992899974479
Q ss_pred CCCCCCCCCHH
Q ss_conf 77411221000
Q gi|254780787|r 531 LNLDKLLDAIL 541 (884)
Q Consensus 531 ~~~~~~~~~~~ 541 (884)
T Consensus 161 ~Gi~~L~~~I~ 171 (174)
T cd01895 161 QGVDKLFDAID 171 (174)
T ss_pred CCHHHHHHHHH
T ss_conf 89999999999