HHsearch alignment for GI: 254780787 and conserved domain: cd04112

>cd04112 Rab26 Rab26 subfamily. First identified in rat pancreatic acinar cells, Rab26 is believed to play a role in recruiting mature granules to the plasma membrane upon beta-adrenergic stimulation. Rab26 belongs to the Rab functional group III, which are considered key regulators of intracellular vesicle transport during exocytosis. GTPase activating proteins (GAPs) interact with GTP-bound Rab and accelerate the hydrolysis of GTP to GDP. Guanine nucleotide exchange factors (GEFs) interact with GDP-bound Rabs to promote the formation of the GTP-bound state. Rabs are further regulated by guanine nucleotide dissociation inhibitors (GDIs), which facilitate Rab recycling by masking C-terminal lipid binding and promoting cytosolic localization. Most Rab GTPases contain a lipid modification site at the C-terminus, with sequence motifs CC, CXC, or CCX. Lipid binding is essential for membrane attachment, a key feature of most Rab proteins.
Probab=99.15  E-value=1.6e-10  Score=89.98  Aligned_cols=144  Identities=23%  Similarity=0.303  Sum_probs=96.6

Q ss_pred             EEEEECCCCCHHHHHHHHHHHHHHHCCCCCCEECCCEEE----EECC--CCEEEEEECCCHHHHHHHHHHHHHCCCCEEE
Q ss_conf             898623685044677788642221001231000121499----9517--8438888516615789998666420680599
Q gi|254780787|r  386 VTIMGHVDHGKTSLLDAIRKADVAKGEIGGITQHIGAYQ----VAYQ--GKNITFLDTPGHAAFYEMRARGARVTDIAVL  459 (884)
Q Consensus       386 v~v~ghvd~GKt~lld~~r~~~~~~~e~ggitq~iga~~----~~~~--~~~~~~iDtPGh~~f~~~r~rg~~~~d~~il  459 (884)
T Consensus         3 Iv~vGd~~VGKTsli~r~~~~~f~~~~---~~~Ti~~~~~~k~~~~~~~~v~l~iwDtaG~e~~~~l~~~~~~~a~~~il   79 (191)
T cd04112           3 VMLLGDSGVGKTCLLVRFKDGAFLNGN---FIATVGIDFRNKVVTVDGVKVKLQIWDTAGQERFRSVTHAYYRDAHALLL   79 (191)
T ss_pred             EEEECCCCCCHHHHHHHHHHCCCCCCC---CCCCCCEEEEEEEEEECCEEEEEEEEECCCCCCCCCCHHHHHHCCCEEEE
T ss_conf             999994998799999999959789998---67765247799999999999999999799863346464777117777899


Q ss_pred             EEECCCCCCHHHHHHHH----HHH---HCCCCEEEECCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCEEEEEEECCCCC
Q ss_conf             99836674023577789----899---70994156123312443320002210000132000123474036311002477
Q gi|254780787|r  460 VLAADEEIMPQAIESIN----HAK---AADVSIIVAINKIDKLGADPQKVRMSLLKHDVFVESMGGDILDVEISAKNNLN  532 (884)
Q Consensus       460 vv~~~~g~~~qt~e~~~----~~~---~~~~p~iva~nk~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  532 (884)
T Consensus        80 vydit~---~~Sf~~l~~w~~~i~~~~~~~~~iilVGNK~DL~~~--r~V~~~e~~--~~a~~~--~~~f~EtSAkt~~n  150 (191)
T cd04112          80 LYDITN---KASFDNIRAWLTEIKEYAQEDVVIMLLGNKADMSGE--RVVKREDGE--RLAKEY--GVPFMETSAKTGLN  150 (191)
T ss_pred             EEECCC---HHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCC--CCCCHHHHH--HHHHHC--CCEEEEECCCCCCC
T ss_conf             972798---899999999999999866678538986124655302--679999999--999982--99799985489809


Q ss_pred             CCCCCCCHH
Q ss_conf             411221000
Q gi|254780787|r  533 LDKLLDAIL  541 (884)
Q Consensus       533 ~~~~~~~~~  541 (884)
T Consensus       151 I~e~F~~i~  159 (191)
T cd04112         151 VELAFTAVA  159 (191)
T ss_pred             HHHHHHHHH
T ss_conf             799999999