HHsearch alignment for GI: 254780787 and conserved domain: cd04159
>cd04159 Arl10_like Arl10-like subfamily. Arl9/Arl10 was identified from a human cancer-derived EST dataset. No functional information about the subfamily is available at the current time, but crystal structures of human Arl10b and Arl10c have been solved.
Probab=99.45 E-value=8.6e-13 Score=105.46 Aligned_cols=146 Identities=23% Similarity=0.319 Sum_probs=102.6
Q ss_pred EEEEECCCCCHHHHHHHHHHHHHHHCCCCCCEECCCEE--EEECCCCEEEEEECCCHHHHHHHHHHHHHCCCCEEEEEEC
Q ss_conf 89862368504467778864222100123100012149--9951784388885166157899986664206805999983
Q gi|254780787|r 386 VTIMGHVDHGKTSLLDAIRKADVAKGEIGGITQHIGAY--QVAYQGKNITFLDTPGHAAFYEMRARGARVTDIAVLVLAA 463 (884)
Q Consensus 386 v~v~ghvd~GKt~lld~~r~~~~~~~e~ggitq~iga~--~~~~~~~~~~~iDtPGh~~f~~~r~rg~~~~d~~ilvv~~ 463 (884)
T Consensus 2 I~llG~~~~GKTsll~~~~~~~f~~~----~~pTig~~~~~i~~~~~~l~iwDt~G~e~~~~l~~~y~~~~~~ii~V~D~ 77 (159)
T cd04159 2 ITLVGLQNSGKTTLVNVIAGGQFSED----TIPTVGFNMRKVTKGNVTLKVWDLGGQPRFRSMWERYCRGVNAIVYVVDA 77 (159)
T ss_pred EEEECCCCCCHHHHHHHHHCCCCCCC----CCCCCCEEEEEEEECCEEEEEEECCCHHHHHHHHHHHHCCCCEEEECCCC
T ss_conf 89999999869999999975999886----16732505899998999999997983587799999874686368751577
Q ss_pred CCCCCHHHHHHHH--------HHHHCCCCEEEECCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCEEEEEEECCCCCCCC
Q ss_conf 6674023577789--------89970994156123312443320002210000132000123474036311002477411
Q gi|254780787|r 464 DEEIMPQAIESIN--------HAKAADVSIIVAINKIDKLGADPQKVRMSLLKHDVFVESMGGDILDVEISAKNNLNLDK 535 (884)
Q Consensus 464 ~~g~~~qt~e~~~--------~~~~~~~p~iva~nk~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 535 (884)
T Consensus 78 sd---~~s~~~~~~~l~~~~~~~~~~~~piliv~NK~Dl~~~~~~~~i~~~~~---~~~~~~~~~~~~~~SAktg~gI~e 151 (159)
T cd04159 78 AD---RTALEAAKNELHDLLEKPSLEGIPLLVLGNKNDLPGALSVDELIEQMN---LKSITDREVSCYSISCKEKTNIDI 151 (159)
T ss_pred CC---HHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCHHHHHHHHH---HHHHHCCCCEEEEEECCCCCCHHH
T ss_conf 87---889999999999998544348982898883567643478999999999---998734998799997968969899
Q ss_pred CCCCHH
Q ss_conf 221000
Q gi|254780787|r 536 LLDAIL 541 (884)
Q Consensus 536 ~~~~~~ 541 (884)
T Consensus 152 ~f~wL~ 157 (159)
T cd04159 152 VLDWLI 157 (159)
T ss_pred HHHHHH
T ss_conf 999996