HHsearch alignment for GI: 254780787 and conserved domain: pfam02421
>pfam02421 FeoB_N Ferrous iron transport protein B. Escherichia coli has an iron(II) transport system (feo) which may make an important contribution to the iron supply of the cell under anaerobic conditions. FeoB has been identified as part of this transport system. FeoB is a large 700-800 amino acid integral membrane protein. The N terminus contains a P-loop motif suggesting that iron transport may be ATP dependent.
Probab=99.66 E-value=8.8e-16 Score=125.90 Aligned_cols=148 Identities=25% Similarity=0.381 Sum_probs=102.3
Q ss_pred EEEEECCCCCHHHHHHHHHHHHHHHCCCCCCEECCCEEEEECCCCEEEEEECCCHH---HHHH--HHHHHH---HCCCCE
Q ss_conf 89862368504467778864222100123100012149995178438888516615---7899--986664---206805
Q gi|254780787|r 386 VTIMGHVDHGKTSLLDAIRKADVAKGEIGGITQHIGAYQVAYQGKNITFLDTPGHA---AFYE--MRARGA---RVTDIA 457 (884)
Q Consensus 386 v~v~ghvd~GKt~lld~~r~~~~~~~e~ggitq~iga~~~~~~~~~~~~iDtPGh~---~f~~--~r~rg~---~~~d~~ 457 (884)
T Consensus 2 VaIvG~PNvGKSTLlN~L~g~~~~Vs~~pGtTrd~~~~~~~~~~~~~~lvDTpGi~~~~~~~~~e~v~~~~~~~~~aDlv 81 (188)
T pfam02421 2 IALVGNPNVGKTTLFNALTGARQHVGNWPGVTVEKKEGTFKYKGYEIEIVDLPGTYSLSPYSEEEKVARDYLLEEKPDVI 81 (188)
T ss_pred EEEECCCCCCHHHHHHHHHCCCCEEECCCCCCCCEEEEEEEECCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCE
T ss_conf 89988999899999999959996563899972333576875251679999688850146532789999999862368736
Q ss_pred EEEEECCCCCCHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCEEEEEEECCCCCCCCCC
Q ss_conf 99998366740235777898997099415612331244332000221000013200012347403631100247741122
Q gi|254780787|r 458 VLVLAADEEIMPQAIESINHAKAADVSIIVAINKIDKLGADPQKVRMSLLKHDVFVESMGGDILDVEISAKNNLNLDKLL 537 (884)
Q Consensus 458 ilvv~~~~g~~~qt~e~~~~~~~~~~p~iva~nk~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 537 (884)
T Consensus 82 l~vvDa~~-~e-r~l~l~~~l~~~~~p~IvVlNK~Dl~~~~~~~~~~~~-----l~~~lg--~~vi~ISA~~g~Gi~eL~ 152 (188)
T pfam02421 82 INVVDATN-LE-RNLYLTLQLLELGIPVVVALNMMDEAEKKGIKIDIKK-----LSELLG--VPVVPTSARKGEGIDELK 152 (188)
T ss_pred EEEEECCC-HH-HHHHHHHHHHHCCCCEEEEECCCHHCCCCCCHHHHHH-----HHHHCC--CCEEEEEEECCCCHHHHH
T ss_conf 99976762-45-4489999999769988999617020100365203999-----998739--968999931699999999
Q ss_pred CCHHC
Q ss_conf 10000
Q gi|254780787|r 538 DAILL 542 (884)
Q Consensus 538 ~~~~~ 542 (884)
T Consensus 153 ~~I~~ 157 (188)
T pfam02421 153 DAIIE 157 (188)
T ss_pred HHHHH
T ss_conf 99999