HHsearch alignment for GI: 254780787 and conserved domain: pfam03308
>pfam03308 ArgK ArgK protein. The ArgK protein acts as an ATPase enzyme and as a kinase, and phosphorylates periplasmic binding proteins involved in the LAO (lysine, arginine, ornithine)/AO transport systems.
Probab=97.67 E-value=0.00032 Score=46.80 Aligned_cols=155 Identities=25% Similarity=0.242 Sum_probs=99.3
Q ss_pred CCCCEEEEEECCCCCHHHHHHHHHHHHHHHCCC-------------CC-----------CEECCCEEEEEC---------
Q ss_conf 553038986236850446777886422210012-------------31-----------000121499951---------
Q gi|254780787|r 381 IRPPVVTIMGHVDHGKTSLLDAIRKADVAKGEI-------------GG-----------ITQHIGAYQVAY--------- 427 (884)
Q Consensus 381 ~R~pvv~v~ghvd~GKt~lld~~r~~~~~~~e~-------------gg-----------itq~iga~~~~~--------- 427 (884)
T Consensus 27 g~a~~iGiTG~PGaGKStli~~l~~~~~~~g~~vaVlAvDPSS~~sgGaiLGDr~RM~~~~~~~~vfiRs~~srg~lGGl 106 (267)
T pfam03308 27 GRAHRVGITGVPGAGKSTLIEALGMELRRRGHRVAVLAVDPSSPFTGGSILGDRTRMQRLAVDPGAFIRSSPSRGALGGL 106 (267)
T ss_pred CCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCHHHHHHHCCCCCEEEEECCCCCCCCCC
T ss_conf 99559987689988799999999999996898689999789998888630010777765058998588645778888871
Q ss_pred -------------CCCEEEEEECCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCCEEEECCCCCC
Q ss_conf -------------7843888851661578999866642068059999836674023577789899709941561233124
Q gi|254780787|r 428 -------------QGKNITFLDTPGHAAFYEMRARGARVTDIAVLVLAADEEIMPQAIESINHAKAADVSIIVAINKIDK 494 (884)
Q Consensus 428 -------------~~~~~~~iDtPGh~~f~~~r~rg~~~~d~~ilvv~~~~g~~~qt~e~~~~~~~~~~p~iva~nk~d~ 494 (884)
T Consensus 107 s~~t~~~i~lleaaGfD~IivETVGVGQsE~---~v~~~aD~~llv~~Pg~GDeiQ~iKa----GImEiaDi~vVNKaD~ 179 (267)
T pfam03308 107 SRATREAILLLDAAGFDVIIIETVGVGQSEV---DIANMADTFVLVTIPGGGDDLQGIKA----GLMEIADIYVVNKADL 179 (267)
T ss_pred CHHHHHHHHHHHHCCCCEEEEECCCCCCCCH---HHHHHCCEEEEEECCCCCHHHHHHHH----HHHHHCCEEEEECCCH
T ss_conf 4769999999997799999992477775303---55541576899955887608889875----3765354899966764
Q ss_pred CCCCCCHHHHHHHCCCCC--CCCCCCCCEEEEEEECCCCCCCCCCCCHHCCC
Q ss_conf 433200022100001320--00123474036311002477411221000023
Q gi|254780787|r 495 LGADPQKVRMSLLKHDVF--VESMGGDILDVEISAKNNLNLDKLLDAILLQA 544 (884)
Q Consensus 495 ~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 544 (884)
T Consensus 180 ~~A~--~~~~~l~~~l~l~~~~~~~W~p~Vl~tSA~~g~Gi~el~~~I~~~~ 229 (267)
T pfam03308 180 PGAE--RTARELRSALHLLTPKEAGWRPPVLTTSAVTGEGIDELWDAIEEHR 229 (267)
T ss_pred HHHH--HHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHH
T ss_conf 7699--9999999998517987789999989987478899999999999999