RPSBLAST alignment for GI: 254780787 and conserved domain: TIGR00487
>gnl|CDD|161900 TIGR00487, IF-2, translation initiation factor IF-2. This model discriminates eubacterial (and mitochondrial) translation initiation factor 2 (IF-2), encoded by the infB gene in bacteria, from similar proteins in the Archaea and Eukaryotes. In the bacteria and in organelles, the initiator tRNA is charged with N-formyl-Met instead of Met. This translation factor acts in delivering the initator tRNA to the ribosome. It is one of a number of GTP-binding translation factors recognized by the pfam model GTP_EFTU. Length = 587
Score = 654 bits (1689), Expect = 0.0
Identities = 289/589 (49%), Positives = 405/589 (68%), Gaps = 6/589 (1%)
Query: 298 ISREIVVPETITIQELSQRMSERSADVIKFLMKEGQIMKPGDVIDADLSEIIANEFGNTV 357
IV+ T+T+ EL+ +M+ + +D+IK LM G ++ V+D + +E++A EFG V
Sbjct: 2 KPSVIVIGGTLTVSELANKMNIKVSDIIKKLMLLGVMVTINQVLDKETAELVAEEFGVKV 61
Query: 358 KRVLESDIEVGIFDVADSESDLDIRPPVVTIMGHVDHGKTSLLDAIRKADVAKGEIGGIT 417
+ + + DS L RPPVVTIMGHVDHGKTSLLD+IRK VA+GE GGIT
Sbjct: 62 EVRVTLEETEAEEQDEDSGDLLVERPPVVTIMGHVDHGKTSLLDSIRKTKVAQGEAGGIT 121
Query: 418 QHIGAYQVAY-QGKNITFLDTPGHAAFYEMRARGARVTDIAVLVLAADEEIMPQAIESIN 476
QHIGAY V GK ITFLDTPGH AF MRARGA+VTDI VLV+AAD+ +MPQ IE+I+
Sbjct: 122 QHIGAYHVENEDGKMITFLDTPGHEAFTSMRARGAKVTDIVVLVVAADDGVMPQTIEAIS 181
Query: 477 HAKAADVSIIVAINKIDKLGADPQKVRMSLLKHDVFVESMGGDILDVEISAKNNLNLDKL 536
HAKAA+V IIVAINKIDK A+P +V+ L ++ + E GGD + V +SA +D+L
Sbjct: 182 HAKAANVPIIVAINKIDKPEANPDRVKQELSEYGLVPEDWGGDTIFVPVSALTGDGIDEL 241
Query: 537 LDAILLQAEMLDLKTSINRKAEGIVVEGKLDRGRGPVVTVLVQKGTLSKGNILVVGDQWG 596
LD ILLQ+E+ +LK + N +A G+V+E +LD+GRGPV TVLVQ GTL G+I+VVG +G
Sbjct: 242 LDMILLQSEVEELKANPNGQASGVVIEAQLDKGRGPVATVLVQSGTLRVGDIVVVGAAYG 301
Query: 597 KIRALFNDRGQGISKAVPSMPIEVLGLQGMPMAGDKFGVVDSESRAREIAQYRQRVTRNK 656
++RA+ ++ G+ + +A PS P+E+LGL +P AGD+F V E AR +A+ R R K
Sbjct: 302 RVRAMIDENGKSVKEAGPSKPVEILGLSDVPAAGDEFIVFKDEKDARLVAEKRAGKLRQK 361
Query: 657 SMARRLGSHSALEKLVKNANISSK-MKEFPVIIKGDVQGSVEAIVDSLGALKNSEVCLSI 715
+++R + L+ L I +KE +I+K DVQGS+EAI +SL L N EV + +
Sbjct: 362 ALSRSV--KVTLDNL--FEQIKEGELKELNIILKADVQGSLEAIKNSLEKLNNEEVKVKV 417
Query: 716 VHSSVGAINETDVSLAKASGAVIFGFNVRASSQARVLAIKDEIKILYYKIIYDLLDSIKD 775
+HS VG I ETD+SLA AS A+I GFNVR + A+ +A + + I YY +IY L+D I+
Sbjct: 418 IHSGVGGITETDISLASASNAIIIGFNVRPDATAKNVAEAENVDIRYYSVIYKLIDEIRA 477
Query: 776 SMSELLSPEIRETFLGNAEVLEVFAVTKLGNVAGCKVSEGKVERGSGVRLIRNSTVIYEG 835
+M +L PE E +G AEV +VF V K+GN+AGC V+EG ++RG+ +R+IR+ VI+EG
Sbjct: 478 AMKGMLDPEYEEEIIGQAEVRQVFNVPKIGNIAGCYVTEGVIKRGNPLRVIRDGVVIFEG 537
Query: 836 KLKTLKRFKDEVSEVHAGQDCGMAFEKYDNIQAGDMIECFSIEHIKRSL 884
++ +LKRFKD+V EV G +CG+ + Y++I+ GD+IE F ++ +KR+L
Sbjct: 538 EIDSLKRFKDDVKEVSNGYECGIGIKNYNDIKEGDIIEAFEVQEVKRTL 586