RPSBLAST alignment for GI: 254780787 and conserved domain: TIGR00487

>gnl|CDD|161900 TIGR00487, IF-2, translation initiation factor IF-2. This model discriminates eubacterial (and mitochondrial) translation initiation factor 2 (IF-2), encoded by the infB gene in bacteria, from similar proteins in the Archaea and Eukaryotes. In the bacteria and in organelles, the initiator tRNA is charged with N-formyl-Met instead of Met. This translation factor acts in delivering the initator tRNA to the ribosome. It is one of a number of GTP-binding translation factors recognized by the pfam model GTP_EFTU. Length = 587
 Score =  654 bits (1689), Expect = 0.0
 Identities = 289/589 (49%), Positives = 405/589 (68%), Gaps = 6/589 (1%)

Query: 298 ISREIVVPETITIQELSQRMSERSADVIKFLMKEGQIMKPGDVIDADLSEIIANEFGNTV 357
               IV+  T+T+ EL+ +M+ + +D+IK LM  G ++    V+D + +E++A EFG  V
Sbjct: 2   KPSVIVIGGTLTVSELANKMNIKVSDIIKKLMLLGVMVTINQVLDKETAELVAEEFGVKV 61

Query: 358 KRVLESDIEVGIFDVADSESDLDIRPPVVTIMGHVDHGKTSLLDAIRKADVAKGEIGGIT 417
           +  +  +         DS   L  RPPVVTIMGHVDHGKTSLLD+IRK  VA+GE GGIT
Sbjct: 62  EVRVTLEETEAEEQDEDSGDLLVERPPVVTIMGHVDHGKTSLLDSIRKTKVAQGEAGGIT 121

Query: 418 QHIGAYQVAY-QGKNITFLDTPGHAAFYEMRARGARVTDIAVLVLAADEEIMPQAIESIN 476
           QHIGAY V    GK ITFLDTPGH AF  MRARGA+VTDI VLV+AAD+ +MPQ IE+I+
Sbjct: 122 QHIGAYHVENEDGKMITFLDTPGHEAFTSMRARGAKVTDIVVLVVAADDGVMPQTIEAIS 181

Query: 477 HAKAADVSIIVAINKIDKLGADPQKVRMSLLKHDVFVESMGGDILDVEISAKNNLNLDKL 536
           HAKAA+V IIVAINKIDK  A+P +V+  L ++ +  E  GGD + V +SA     +D+L
Sbjct: 182 HAKAANVPIIVAINKIDKPEANPDRVKQELSEYGLVPEDWGGDTIFVPVSALTGDGIDEL 241

Query: 537 LDAILLQAEMLDLKTSINRKAEGIVVEGKLDRGRGPVVTVLVQKGTLSKGNILVVGDQWG 596
           LD ILLQ+E+ +LK + N +A G+V+E +LD+GRGPV TVLVQ GTL  G+I+VVG  +G
Sbjct: 242 LDMILLQSEVEELKANPNGQASGVVIEAQLDKGRGPVATVLVQSGTLRVGDIVVVGAAYG 301

Query: 597 KIRALFNDRGQGISKAVPSMPIEVLGLQGMPMAGDKFGVVDSESRAREIAQYRQRVTRNK 656
           ++RA+ ++ G+ + +A PS P+E+LGL  +P AGD+F V   E  AR +A+ R    R K
Sbjct: 302 RVRAMIDENGKSVKEAGPSKPVEILGLSDVPAAGDEFIVFKDEKDARLVAEKRAGKLRQK 361

Query: 657 SMARRLGSHSALEKLVKNANISSK-MKEFPVIIKGDVQGSVEAIVDSLGALKNSEVCLSI 715
           +++R +     L+ L     I    +KE  +I+K DVQGS+EAI +SL  L N EV + +
Sbjct: 362 ALSRSV--KVTLDNL--FEQIKEGELKELNIILKADVQGSLEAIKNSLEKLNNEEVKVKV 417

Query: 716 VHSSVGAINETDVSLAKASGAVIFGFNVRASSQARVLAIKDEIKILYYKIIYDLLDSIKD 775
           +HS VG I ETD+SLA AS A+I GFNVR  + A+ +A  + + I YY +IY L+D I+ 
Sbjct: 418 IHSGVGGITETDISLASASNAIIIGFNVRPDATAKNVAEAENVDIRYYSVIYKLIDEIRA 477

Query: 776 SMSELLSPEIRETFLGNAEVLEVFAVTKLGNVAGCKVSEGKVERGSGVRLIRNSTVIYEG 835
           +M  +L PE  E  +G AEV +VF V K+GN+AGC V+EG ++RG+ +R+IR+  VI+EG
Sbjct: 478 AMKGMLDPEYEEEIIGQAEVRQVFNVPKIGNIAGCYVTEGVIKRGNPLRVIRDGVVIFEG 537

Query: 836 KLKTLKRFKDEVSEVHAGQDCGMAFEKYDNIQAGDMIECFSIEHIKRSL 884
           ++ +LKRFKD+V EV  G +CG+  + Y++I+ GD+IE F ++ +KR+L
Sbjct: 538 EIDSLKRFKDDVKEVSNGYECGIGIKNYNDIKEGDIIEAFEVQEVKRTL 586