BLASTP 2.2.22 [Sep-27-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= gi|254780787|ref|YP_003065200.1| translation initiation factor
IF-2 [Candidatus Liberibacter asiaticus str. psy62]
         (884 letters)

Database: las_proteome 
           1233 sequences; 328,796 total letters

Searching...................................................done



>gi|254780787|ref|YP_003065200.1| translation initiation factor IF-2 [Candidatus Liberibacter
           asiaticus str. psy62]
          Length = 884

 Score = 1782 bits (4616), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 884/884 (100%), Positives = 884/884 (100%)

Query: 1   MTDNKDNKKSNVVEKKTLTLKTSSLGVGHSSFQNQGANQGRARSVVVETRKRRSYVQGEE 60
           MTDNKDNKKSNVVEKKTLTLKTSSLGVGHSSFQNQGANQGRARSVVVETRKRRSYVQGEE
Sbjct: 1   MTDNKDNKKSNVVEKKTLTLKTSSLGVGHSSFQNQGANQGRARSVVVETRKRRSYVQGEE 60

Query: 61  KVSVFRKSSRVIESSSDSSQDLSQAKAKGNFRRASRSDKVSSQKNDSSFAGLSQGEIESR 120
           KVSVFRKSSRVIESSSDSSQDLSQAKAKGNFRRASRSDKVSSQKNDSSFAGLSQGEIESR
Sbjct: 61  KVSVFRKSSRVIESSSDSSQDLSQAKAKGNFRRASRSDKVSSQKNDSSFAGLSQGEIESR 120

Query: 121 RRALHEAQVREEELRKRLEQQSLEQPSQESSIDLPEVCDSQQVPEQVLEDPCKEKDLEIK 180
           RRALHEAQVREEELRKRLEQQSLEQPSQESSIDLPEVCDSQQVPEQVLEDPCKEKDLEIK
Sbjct: 121 RRALHEAQVREEELRKRLEQQSLEQPSQESSIDLPEVCDSQQVPEQVLEDPCKEKDLEIK 180

Query: 181 DVDVGTEVESSVILSHDMGDSDSSSVVNNKFRESSSDASSNRGKSRGGAGKYASVNSSKP 240
           DVDVGTEVESSVILSHDMGDSDSSSVVNNKFRESSSDASSNRGKSRGGAGKYASVNSSKP
Sbjct: 181 DVDVGTEVESSVILSHDMGDSDSSSVVNNKFRESSSDASSNRGKSRGGAGKYASVNSSKP 240

Query: 241 VTRNKVGDDDKKYKKVRIAVAADVDEEGGASRGRSLSAMRRRQEKFRRNQQQEKREKISR 300
           VTRNKVGDDDKKYKKVRIAVAADVDEEGGASRGRSLSAMRRRQEKFRRNQQQEKREKISR
Sbjct: 241 VTRNKVGDDDKKYKKVRIAVAADVDEEGGASRGRSLSAMRRRQEKFRRNQQQEKREKISR 300

Query: 301 EIVVPETITIQELSQRMSERSADVIKFLMKEGQIMKPGDVIDADLSEIIANEFGNTVKRV 360
           EIVVPETITIQELSQRMSERSADVIKFLMKEGQIMKPGDVIDADLSEIIANEFGNTVKRV
Sbjct: 301 EIVVPETITIQELSQRMSERSADVIKFLMKEGQIMKPGDVIDADLSEIIANEFGNTVKRV 360

Query: 361 LESDIEVGIFDVADSESDLDIRPPVVTIMGHVDHGKTSLLDAIRKADVAKGEIGGITQHI 420
           LESDIEVGIFDVADSESDLDIRPPVVTIMGHVDHGKTSLLDAIRKADVAKGEIGGITQHI
Sbjct: 361 LESDIEVGIFDVADSESDLDIRPPVVTIMGHVDHGKTSLLDAIRKADVAKGEIGGITQHI 420

Query: 421 GAYQVAYQGKNITFLDTPGHAAFYEMRARGARVTDIAVLVLAADEEIMPQAIESINHAKA 480
           GAYQVAYQGKNITFLDTPGHAAFYEMRARGARVTDIAVLVLAADEEIMPQAIESINHAKA
Sbjct: 421 GAYQVAYQGKNITFLDTPGHAAFYEMRARGARVTDIAVLVLAADEEIMPQAIESINHAKA 480

Query: 481 ADVSIIVAINKIDKLGADPQKVRMSLLKHDVFVESMGGDILDVEISAKNNLNLDKLLDAI 540
           ADVSIIVAINKIDKLGADPQKVRMSLLKHDVFVESMGGDILDVEISAKNNLNLDKLLDAI
Sbjct: 481 ADVSIIVAINKIDKLGADPQKVRMSLLKHDVFVESMGGDILDVEISAKNNLNLDKLLDAI 540

Query: 541 LLQAEMLDLKTSINRKAEGIVVEGKLDRGRGPVVTVLVQKGTLSKGNILVVGDQWGKIRA 600
           LLQAEMLDLKTSINRKAEGIVVEGKLDRGRGPVVTVLVQKGTLSKGNILVVGDQWGKIRA
Sbjct: 541 LLQAEMLDLKTSINRKAEGIVVEGKLDRGRGPVVTVLVQKGTLSKGNILVVGDQWGKIRA 600

Query: 601 LFNDRGQGISKAVPSMPIEVLGLQGMPMAGDKFGVVDSESRAREIAQYRQRVTRNKSMAR 660
           LFNDRGQGISKAVPSMPIEVLGLQGMPMAGDKFGVVDSESRAREIAQYRQRVTRNKSMAR
Sbjct: 601 LFNDRGQGISKAVPSMPIEVLGLQGMPMAGDKFGVVDSESRAREIAQYRQRVTRNKSMAR 660

Query: 661 RLGSHSALEKLVKNANISSKMKEFPVIIKGDVQGSVEAIVDSLGALKNSEVCLSIVHSSV 720
           RLGSHSALEKLVKNANISSKMKEFPVIIKGDVQGSVEAIVDSLGALKNSEVCLSIVHSSV
Sbjct: 661 RLGSHSALEKLVKNANISSKMKEFPVIIKGDVQGSVEAIVDSLGALKNSEVCLSIVHSSV 720

Query: 721 GAINETDVSLAKASGAVIFGFNVRASSQARVLAIKDEIKILYYKIIYDLLDSIKDSMSEL 780
           GAINETDVSLAKASGAVIFGFNVRASSQARVLAIKDEIKILYYKIIYDLLDSIKDSMSEL
Sbjct: 721 GAINETDVSLAKASGAVIFGFNVRASSQARVLAIKDEIKILYYKIIYDLLDSIKDSMSEL 780

Query: 781 LSPEIRETFLGNAEVLEVFAVTKLGNVAGCKVSEGKVERGSGVRLIRNSTVIYEGKLKTL 840
           LSPEIRETFLGNAEVLEVFAVTKLGNVAGCKVSEGKVERGSGVRLIRNSTVIYEGKLKTL
Sbjct: 781 LSPEIRETFLGNAEVLEVFAVTKLGNVAGCKVSEGKVERGSGVRLIRNSTVIYEGKLKTL 840

Query: 841 KRFKDEVSEVHAGQDCGMAFEKYDNIQAGDMIECFSIEHIKRSL 884
           KRFKDEVSEVHAGQDCGMAFEKYDNIQAGDMIECFSIEHIKRSL
Sbjct: 841 KRFKDEVSEVHAGQDCGMAFEKYDNIQAGDMIECFSIEHIKRSL 884


>gi|254780263|ref|YP_003064676.1| translation elongation factor Tu [Candidatus Liberibacter asiaticus
           str. psy62]
          Length = 392

 Score = 58.2 bits (139), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 46/128 (35%), Positives = 67/128 (52%), Gaps = 17/128 (13%)

Query: 386 VTIMGHVDHGKTSLLDAIRKA-----------DVAKGE-IGGITQHIGAYQVAYQG--KN 431
           ++ +GHVDHGKT+L  AI K            D A  E + GIT  I    V+Y+   + 
Sbjct: 15  LSTIGHVDHGKTTLTAAITKYYSEEKKEYGDIDSAPEEKLRGIT--IATAHVSYETDKRF 72

Query: 432 ITFLDTPGHAAFYEMRARGARVTDIAVLVLAADEEIMPQAIESINHAKAADV-SIIVAIN 490
            + +D PGHA + +    GA   D A+LV AA++   PQ  E I  A+   + SI+V +N
Sbjct: 73  YSHIDCPGHADYVKNMITGATQADGAILVCAAEDGPKPQTREHILLARQIGISSIVVYMN 132

Query: 491 KIDKLGAD 498
           K+D +  D
Sbjct: 133 KVDAVDDD 140


>gi|254780150|ref|YP_003064563.1| translation elongation factor Tu [Candidatus Liberibacter asiaticus
           str. psy62]
          Length = 392

 Score = 58.2 bits (139), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 46/128 (35%), Positives = 67/128 (52%), Gaps = 17/128 (13%)

Query: 386 VTIMGHVDHGKTSLLDAIRKA-----------DVAKGE-IGGITQHIGAYQVAYQG--KN 431
           ++ +GHVDHGKT+L  AI K            D A  E + GIT  I    V+Y+   + 
Sbjct: 15  LSTIGHVDHGKTTLTAAITKYYSEEKKEYGDIDSAPEEKLRGIT--IATAHVSYETDKRF 72

Query: 432 ITFLDTPGHAAFYEMRARGARVTDIAVLVLAADEEIMPQAIESINHAKAADV-SIIVAIN 490
            + +D PGHA + +    GA   D A+LV AA++   PQ  E I  A+   + SI+V +N
Sbjct: 73  YSHIDCPGHADYVKNMITGATQADGAILVCAAEDGPKPQTREHILLARQIGISSIVVYMN 132

Query: 491 KIDKLGAD 498
           K+D +  D
Sbjct: 133 KVDAVDDD 140


>gi|254780264|ref|YP_003064677.1| elongation factor G [Candidatus Liberibacter asiaticus str. psy62]
          Length = 701

 Score = 57.0 bits (136), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 49/193 (25%), Positives = 83/193 (43%), Gaps = 32/193 (16%)

Query: 388 IMGHVDHGKTSLLDAIRKADVAKGEIG------------------GITQHIGAYQVAYQG 429
           IM H+D GKT+  + I        +IG                  GIT    +  V + G
Sbjct: 15  IMAHIDAGKTTTTERILYYAGKSHKIGEVHDGSATMDWMEQEQERGITITSASTTVFWPG 74

Query: 430 -----KNITFLDTPGHAAFYEMRARGARVTDIAVLVLAADEEIMPQAIESINHAKAADVS 484
                K +T +DTPGH  F     R  RVTD A+ +L ++  + PQ       A    V 
Sbjct: 75  RDGGQKKLTIIDTPGHVDFTMEVERSIRVTDGAIALLDSNAGVEPQTETVWRQADKYSVP 134

Query: 485 IIVAINKIDKLGADPQKVRMSLLKHDVFVESMGGDILDVEISAKNNLNLDKLLDAILLQA 544
            ++  NK+DK+GAD  +        ++    +G + L +++   +  N   ++D + ++A
Sbjct: 135 RVIFCNKMDKMGADFYR------SVEMISSRLGANPLVIQLPVGSESNFQGVIDLVEMKA 188

Query: 545 EML---DLKTSIN 554
            +    DL +S +
Sbjct: 189 LLWKNEDLGSSWD 201


>gi|254780321|ref|YP_003064734.1| GTP-binding protein LepA [Candidatus Liberibacter asiaticus str.
           psy62]
          Length = 606

 Score = 52.8 bits (125), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 52/223 (23%), Positives = 96/223 (43%), Gaps = 31/223 (13%)

Query: 387 TIMGHVDHGKTSLLD-----------------AIRKADVAKGEIGGITQHIGAYQVAYQG 429
           +I+ H+DHGK++L D                  +   D+ +    GIT      ++ Y  
Sbjct: 15  SIVAHIDHGKSTLADRFIQHCRGLTEREMSSQVLDNMDIERER--GITIKAQTVRLNYTS 72

Query: 430 KN-----ITFLDTPGHAAFYEMRARGARVTDIAVLVLAADEEIMPQAIESINHAKAADVS 484
            +     +  +DTPGH  F    +R     + ++LV+ A + +  Q + ++  A   +  
Sbjct: 73  TDAKDYQLNLIDTPGHVDFTYEVSRSLSACEGSLLVVDATQGVEAQTLANVYQAIDNNHE 132

Query: 485 IIVAINKIDKLGADPQKVRMSLLKHDVFVESMGGDILD-VEISAKNNLNLDKLLDAILLQ 543
           II  +NK D   ADP +V+  +       E++G    D + +SAK    +  LL+ I+ Q
Sbjct: 133 IITVLNKADLPSADPDRVKKQI------EETIGISTEDALLVSAKTGEGIPLLLERIVQQ 186

Query: 544 AEMLDLKTSINRKAEGIVVEGKLDRGRGPVVTVLVQKGTLSKG 586
                     N   + ++++   +   G +V V +  G L+KG
Sbjct: 187 LPSPTSPEGANAPLKALLIDSWYNSYLGVMVLVRIINGQLTKG 229


>gi|254780233|ref|YP_003064646.1| GTP-binding protein [Candidatus Liberibacter asiaticus str. psy62]
          Length = 624

 Score = 49.3 bits (116), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 41/145 (28%), Positives = 63/145 (43%), Gaps = 22/145 (15%)

Query: 368 GIFDVADSESDLDIRPPVVTIMGHVDHGKTSLLDAIRKA------------------DVA 409
           G+F +      + IR   + I+ HVDHGKT+L+D + K                   D+ 
Sbjct: 6   GLFFIYGRLGYMQIRN--IAIIAHVDHGKTTLVDELLKQSGVFRDNQRVSERVMDCNDLE 63

Query: 410 KGEIGGITQHIGAYQVAYQGKNITFLDTPGHAAFYEMRARGARVTDIAVLVLAADEEIMP 469
           K    GIT       + +    I  +DTPGHA F     R   + +  V+++ A E  MP
Sbjct: 64  KER--GITILAKVTSIVWNDVRINIVDTPGHADFGGEVERILCMVESVVVLVDAAEGPMP 121

Query: 470 QAIESINHAKAADVSIIVAINKIDK 494
           Q    +  A    +  IV +NK+D+
Sbjct: 122 QTKFVVGKALKIGLRPIVVVNKVDR 146


>gi|254780809|ref|YP_003065222.1| tRNA modification GTPase TrmE [Candidatus Liberibacter asiaticus
           str. psy62]
          Length = 440

 Score = 33.9 bits (76), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 19/55 (34%), Positives = 31/55 (56%), Gaps = 1/55 (1%)

Query: 386 VTIMGHVDHGKTSLLDAIRKADVA-KGEIGGITQHIGAYQVAYQGKNITFLDTPG 439
           + I+GH + GK+SL +A+ K DVA   +I G T+ +    +  +G  +   DT G
Sbjct: 222 IVILGHSNAGKSSLFNALAKKDVAIVTDIPGTTRDVLTIDLDLEGYLVKISDTAG 276


>gi|254780873|ref|YP_003065286.1| aspartate kinase [Candidatus Liberibacter asiaticus str. psy62]
          Length = 411

 Score = 26.6 bits (57), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 10/32 (31%), Positives = 22/32 (68%)

Query: 1   MTDNKDNKKSNVVEKKTLTLKTSSLGVGHSSF 32
           ++DNK+N   +V++ +   +K S++G+G  S+
Sbjct: 327 LSDNKENIGYDVIQHEDNLVKISAIGIGMQSY 358


>gi|254780941|ref|YP_003065354.1| GTP-binding protein Era [Candidatus Liberibacter asiaticus str.
           psy62]
          Length = 311

 Score = 26.6 bits (57), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 28/129 (21%), Positives = 49/129 (37%), Gaps = 25/129 (19%)

Query: 382 RPPVVTIMGHVDHGKTSLLD---------AIRKADVAKGEIGGITQHIGAYQVAYQGKNI 432
           R   V ++G  + GK++L++            K    +  + GI        V+ +   I
Sbjct: 21  RSGCVALVGATNAGKSTLVNRFVGAKVSIVTHKVQTTRSIVRGI--------VSEKESQI 72

Query: 433 TFLDTPG--------HAAFYEMRARGARVTDIAVLVLAADEEIMPQAIESINHAKAADVS 484
            FLDTPG        H     +     +  DI  LV+ +  E+     + +         
Sbjct: 73  VFLDTPGIFNAKDSYHKLMIRLSWSTIKHADIVCLVVDSHRELKVNIHDLLKEIAKRSSR 132

Query: 485 IIVAINKID 493
           +I+ +NKID
Sbjct: 133 LILILNKID 141


>gi|254780673|ref|YP_003065086.1| pyruvate dehydrogenase subunit beta [Candidatus Liberibacter
           asiaticus str. psy62]
          Length = 467

 Score = 26.6 bits (57), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 13/38 (34%), Positives = 23/38 (60%), Gaps = 2/38 (5%)

Query: 304 VPETITIQELSQRMSERSADVIKFLMKEGQIMKPGDVI 341
           +P  +T+  LS  M+E   ++ K+   EG ++K GD+I
Sbjct: 1   MPILVTMPSLSPTMTE--GNIAKWKKNEGDLIKQGDII 36


>gi|254781202|ref|YP_003065615.1| hypothetical protein CLIBASIA_05545 [Candidatus Liberibacter
           asiaticus str. psy62]
          Length = 864

 Score = 26.2 bits (56), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 28/103 (27%), Positives = 45/103 (43%), Gaps = 8/103 (7%)

Query: 516 MGGDILDVEISAKNNLNLDKLLDAILLQAEMLDLKTSINRKAEGIVVEGKLDRGRGPVVT 575
           M  +ILD+  SAK        L+ + +Q        ++     G+     L RG  P + 
Sbjct: 675 MFLNILDLSNSAKMPKGASMALNHVWIQ-----YSATMALAGIGVASIKALLRGEDPSLP 729

Query: 576 VLVQKGTLSKGNILVVGDQWGKIRALFNDRGQ--GISKAVPSM 616
            ++  GTL+ G +L   D+  K+ +   DR    G+   VPSM
Sbjct: 730 EVIYDGTLANGALLPYMDRLTKLVSK-GDRAAIGGLLGPVPSM 771


>gi|254780947|ref|YP_003065360.1| transcription-repair coupling factor [Candidatus Liberibacter
           asiaticus str. psy62]
          Length = 1187

 Score = 25.4 bits (54), Expect = 3.6,   Method: Compositional matrix adjust.
 Identities = 24/98 (24%), Positives = 44/98 (44%), Gaps = 8/98 (8%)

Query: 658 MARRLGSHSALEKLVKNANISSKMKEFPVIIKGDVQGSVEAIVDSL--GALKNSEVCLSI 715
           +A +   HS    +V     S  +K FP +   D + +++A++  L  G L +  +C   
Sbjct: 596 IAAKRAIHSVPPLMVSQDLYSQFIKRFPHVETEDQEKAIDAVIQDLSSGRLMDRLIC--- 652

Query: 716 VHSSVGAINETDVSLAKASGAVIFGFNVRASSQARVLA 753
               VG   +T+++L  A  AV+ G  V   +   +L 
Sbjct: 653 --GDVG-FGKTEIALRAAFIAVMNGLQVAVIAPTTLLV 687


>gi|254780498|ref|YP_003064911.1| putative glycerol-3-phosphate acyltransferase PlsX [Candidatus
           Liberibacter asiaticus str. psy62]
          Length = 364

 Score = 25.4 bits (54), Expect = 4.0,   Method: Compositional matrix adjust.
 Identities = 11/38 (28%), Positives = 20/38 (52%)

Query: 253 YKKVRIAVAADVDEEGGASRGRSLSAMRRRQEKFRRNQ 290
           +    +++A D        RGR++S+M R  E  ++NQ
Sbjct: 70  FHHCEVSIAMDERPADALRRGRNVSSMWRAIEAVKKNQ 107


>gi|254780314|ref|YP_003064727.1| outer membrane protein [Candidatus Liberibacter asiaticus str.
           psy62]
          Length = 351

 Score = 25.4 bits (54), Expect = 4.2,   Method: Compositional matrix adjust.
 Identities = 26/94 (27%), Positives = 41/94 (43%), Gaps = 15/94 (15%)

Query: 395 GKTSLLDAIRKADVAKGEIGGITQHI----GAYQVAYQGK----------NITFLDTPGH 440
           GKTS++   R  + + G++G +  HI    G+ + + Q +          N    D P  
Sbjct: 28  GKTSMVSNNRARNRSAGKVGNVLPHITKVGGSLEKSLQARYHKLNGNNEFNSLAYDIPVK 87

Query: 441 AAFYEMRARGARVTDIAVLVLAADEEIMPQAIES 474
               E+ A    VT +A L LA D+ +  Q  ES
Sbjct: 88  GNL-EVNANAGDVTGVAKLKLAVDDVLSMQFAES 120


>gi|254780915|ref|YP_003065328.1| oligoendopeptidase F [Candidatus Liberibacter asiaticus str. psy62]
          Length = 626

 Score = 25.0 bits (53), Expect = 5.5,   Method: Compositional matrix adjust.
 Identities = 20/59 (33%), Positives = 29/59 (49%)

Query: 715 IVHSSVGAINETDVSLAKASGAVIFGFNVRASSQARVLAIKDEIKILYYKIIYDLLDSI 773
           ++ S    I   + SL  A  A IFG  +   S  +  + K+E KIL    I D+L+SI
Sbjct: 425 VLSSETQGILTNNSSLTLAETASIFGETLTFDSLLQAASSKEERKILLANKIEDMLNSI 483


>gi|254780440|ref|YP_003064853.1| transcription elongation factor GreA [Candidatus Liberibacter
           asiaticus str. psy62]
          Length = 158

 Score = 24.6 bits (52), Expect = 7.3,   Method: Compositional matrix adjust.
 Identities = 23/68 (33%), Positives = 35/68 (51%), Gaps = 16/68 (23%)

Query: 530 NLNLDKL--LDAILLQAEMLDLKT-SINRKAEGIVVEGKLDRGRGPVVTVLVQKGTLSKG 586
           NLN  ++  L+ I+ +AE++D+ T S +R A G  V              LV+K +  K 
Sbjct: 57  NLNEGRMAELENIITRAEVIDISTMSGDRIAFGATVS-------------LVEKNSGDKK 103

Query: 587 NILVVGDQ 594
           N  +VGDQ
Sbjct: 104 NYQIVGDQ 111


>gi|254780222|ref|YP_003064635.1| DNA topoisomerase IV subunit B [Candidatus Liberibacter asiaticus
           str. psy62]
          Length = 686

 Score = 24.6 bits (52), Expect = 7.5,   Method: Compositional matrix adjust.
 Identities = 11/24 (45%), Positives = 17/24 (70%)

Query: 242 TRNKVGDDDKKYKKVRIAVAADVD 265
           TR++  ++D +Y+KV I   ADVD
Sbjct: 524 TRSQYREEDLRYEKVIIMTDADVD 547


  Database: las_proteome
    Posted date:  Jun 5, 2011  6:30 PM
  Number of letters in database: 328,796
  Number of sequences in database:  1233
  
Lambda     K      H
   0.313    0.130    0.346 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 509,943
Number of Sequences: 1233
Number of extensions: 20915
Number of successful extensions: 85
Number of sequences better than 100.0: 27
Number of HSP's better than 100.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 11
Number of HSP's that attempted gapping in prelim test: 56
Number of HSP's gapped (non-prelim): 36
length of query: 884
length of database: 328,796
effective HSP length: 82
effective length of query: 802
effective length of database: 227,690
effective search space: 182607380
effective search space used: 182607380
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 43 (21.2 bits)