HHsearch alignment for GI: 254780788 and conserved domain: COG0272

>COG0272 Lig NAD-dependent DNA ligase (contains BRCT domain type II) [DNA replication, recombination, and repair].

Probab=95.49  E-value=0.099  Score=31.98  Aligned_cols=49  Identities=35%  Similarity=0.425  Sum_probs=28.8

Q ss_pred             CCCCCC---CCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHH
Q ss_conf             112258---88467888877321114777505888877653058899999999
Q gi|254780788|r  362 FMQAIN---VDEIIAHLLVAEGFADVEELACVKISEIASIEGFDEETAVEIQG  411 (526)
Q Consensus       362 f~e~Ld---VDE~iA~~LV~eGf~SiEeIa~a~~eeL~~IeGfdee~a~eL~~  411 (526)
T Consensus       510 ~l~aLGIr~VG~~~Ak~La~-~f~sl~~l~~a~~e~l~~i~giG~~vA~si~~  561 (667)
T COG0272         510 FLYALGIRHVGETTAKSLAR-HFGTLEALLAASEEELASIPGIGEVVARSIIE  561 (667)
T ss_pred             HHHHCCCCHHHHHHHHHHHH-HHHHHHHHHHCCHHHHHHCCCHHHHHHHHHHH
T ss_conf             99987971140899999998-76029999842999995066612899999999