HHsearch alignment for GI: 254780788 and conserved domain: PRK07956
>PRK07956 ligA NAD-dependent DNA ligase LigA; Validated.
Probab=94.95 E-value=0.14 Score=30.88 Aligned_cols=51 Identities=31% Similarity=0.457 Sum_probs=44.0
Q ss_pred CCCCCCCCC---CHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHH
Q ss_conf 011122588---8467888877321114777505888877653058899999999
Q gi|254780788|r 360 QFFMQAINV---DEIIAHLLVAEGFADVEELACVKISEIASIEGFDEETAVEIQG 411 (526)
Q Consensus 360 ~~f~e~LdV---DE~iA~~LV~eGf~SiEeIa~a~~eeL~~IeGfdee~a~eL~~ 411 (526)
T Consensus 508 ~r~L~ALGI~~VG~~~Ak~La~~-f~sl~~l~~as~e~L~~I~giG~~~A~si~~ 561 (668)
T PRK07956 508 ARFLYALGIRHVGEKAAKALARH-FGSLEALEAASEEELAAVEGIGEEVAQSIVE 561 (668)
T ss_pred HHHHHHCCCCCCCHHHHHHHHHH-HCCHHHHHHCCHHHHHCCCCCCHHHHHHHHH
T ss_conf 88998627864129999999999-6689999708999985768844999999999