HHsearch alignment for GI: 254780788 and conserved domain: PRK11824

>PRK11824 polynucleotide phosphorylase/polyadenylase; Provisional.
Probab=95.79  E-value=0.11  Score=31.77  Aligned_cols=61  Identities=20%  Similarity=0.239  Sum_probs=43.7

Q ss_pred             CHHHHHHHHCCCCCCCEE--------EE-------CCCC-CEEEEEECCCCCCCCCCCCHHHHHHHHHHHCCEEEEE
Q ss_conf             789999976286654248--------98-------7567-8799998534221102544278999998616745785
Q gi|254780788|r  282 DSATFVINALRPAIVTKV--------VL-------DEDV-GRIEVIVPKEQLSLAIGRRGQNVRLASQLTGWTIDII  342 (526)
Q Consensus       282 d~~~fi~nAl~PA~v~~v--------~~-------de~~-~~~~v~v~~~qls~AIGk~GqNvrLas~Ltg~~idi~  342 (526)
T Consensus       514 i~~~il~~Al~qA~~gR~~IL~~M~~~i~~pr~~~s~~aP~i~~~~i~~~ki~~vIG~gGk~Ik~i~e~tg~~Idi~  590 (694)
T PRK11824        514 ITREIMEEALEQAKEGRLHILGKMNEAISEPRTELSPYAPRIETIKIDPDKIRDVIGPGGKTIREITEETGAKIDIE  590 (694)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECHHHHHHEECCCHHHHHHHHHHHCCEEEEE
T ss_conf             69899999999999999999999987366654333568987999997879866506863388999999889889996