HHsearch alignment for GI: 254780788 and conserved domain: PRK11824
>PRK11824 polynucleotide phosphorylase/polyadenylase; Provisional.
Probab=95.79 E-value=0.11 Score=31.77 Aligned_cols=61 Identities=20% Similarity=0.239 Sum_probs=43.7
Q ss_pred CHHHHHHHHCCCCCCCEE--------EE-------CCCC-CEEEEEECCCCCCCCCCCCHHHHHHHHHHHCCEEEEE
Q ss_conf 789999976286654248--------98-------7567-8799998534221102544278999998616745785
Q gi|254780788|r 282 DSATFVINALRPAIVTKV--------VL-------DEDV-GRIEVIVPKEQLSLAIGRRGQNVRLASQLTGWTIDII 342 (526)
Q Consensus 282 d~~~fi~nAl~PA~v~~v--------~~-------de~~-~~~~v~v~~~qls~AIGk~GqNvrLas~Ltg~~idi~ 342 (526)
T Consensus 514 i~~~il~~Al~qA~~gR~~IL~~M~~~i~~pr~~~s~~aP~i~~~~i~~~ki~~vIG~gGk~Ik~i~e~tg~~Idi~ 590 (694)
T PRK11824 514 ITREIMEEALEQAKEGRLHILGKMNEAISEPRTELSPYAPRIETIKIDPDKIRDVIGPGGKTIREITEETGAKIDIE 590 (694)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECHHHHHHEECCCHHHHHHHHHHHCCEEEEE
T ss_conf 69899999999999999999999987366654333568987999997879866506863388999999889889996