HHsearch alignment for GI: 254780788 and conserved domain: TIGR03491

>TIGR03491 RecB family nuclease, putative, TM0106 family. Members of this uncharacterized protein family are found broadly but sporadically among bacteria. The N-terminal region is homologous to the Cas4 protein of CRISPR systems, although this protein family shows no signs of association with CRISPR repeats.
Probab=91.69  E-value=0.31  Score=28.29  Aligned_cols=31  Identities=42%  Similarity=0.569  Sum_probs=11.6

Q ss_pred             HHHCCCCCCHHHHHHHHHCCCCCHHHHHHCC
Q ss_conf             6640779998999999987984788965326
Q gi|254780788|r  436 ELCSIPGIDSKIKVALGENGIKTMEDLAGCS  466 (526)
Q Consensus       436 ~L~~l~gl~~~~~~~L~e~gIktleDlAels  466 (526)
T Consensus       208 ~LslVagi~~~q~~~L~~~GI~Ti~~LA~~~  238 (457)
T TIGR03491       208 HLSLVPGIGPSRYRLLQELGIHTLEDLAAAD  238 (457)
T ss_pred             CHHHHCCCCHHHHHHHHHCCCCCHHHHHCCC
T ss_conf             9766059999999999985998799986299