HHsearch alignment for GI: 254780788 and conserved domain: TIGR03591

>TIGR03591 polynuc_phos polyribonucleotide nucleotidyltransferase. Members of this protein family are polyribonucleotide nucleotidyltransferase, also called polynucleotide phosphorylase. Some members have been shown also to have additional functions as guanosine pentaphosphate synthetase and as poly(A) polymerase (see model TIGR02696 for an exception clade, within this family).

Probab=94.84  E-value=0.18  Score=30.06  Aligned_cols=62  Identities=23%  Similarity=0.251  Sum_probs=45.4

Q ss_pred             CCHHHHHHHHCCCCCCCEE--------EECCC--------CCEEEEEECCCCCCCCCCCCHHHHHHHHHHHCCEEEEE
Q ss_conf             8789999976286654248--------98756--------78799998534221102544278999998616745785
Q gi|254780788|r  281 PDSATFVINALRPAIVTKV--------VLDED--------VGRIEVIVPKEQLSLAIGRRGQNVRLASQLTGWTIDII  342 (526)
Q Consensus       281 ~d~~~fi~nAl~PA~v~~v--------~~de~--------~~~~~v~v~~~qls~AIGk~GqNvrLas~Ltg~~idi~  342 (526)
T Consensus       510 Gi~~~il~~Al~qA~~~R~~IL~~M~~~i~~pr~~~s~~aP~i~~~~i~~~ki~~vIG~gGk~Ik~i~~~tg~~I~i~  587 (684)
T TIGR03591       510 GITREIMEQALEQAKEGRLHILGEMNKVISEPRAELSPYAPRIETIKINPDKIRDVIGPGGKVIREITEETGAKIDIE  587 (684)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECHHHHHHEECCCCHHHHHHHHHHCCEEEEE
T ss_conf             978999999999999999999999997352543344578875799997878866507875288989999889889985