HHsearch results for GI: 254780788 and protein with PDBid: 1pu6_A
>1pu6_A 3-methyladenine DNA glycosylase; helix-hairpin-helix, base excision repair, hydrolase; HET: KCX; 1.64A {Helicobacter pylori} SCOP: a.96.1.5 PDB: 1pu7_A* 1pu8_A*
Probab=91.12 E-value=0.74 Score=23.95 Aligned_cols=75 Identities=16% Similarity=0.194 Sum_probs=53.7
Q ss_pred HHHHHHHHHHHCCHHHHHHH---HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCHHHHHHHHHCC
Q ss_conf 32111477750588887765---305889999999999999999999989877542843566407799989999999879
Q gi|254780788|r 379 EGFADVEELACVKISEIASI---EGFDEETAVEIQGRAREYLEGIDITLQKKIRELGVSEELCSIPGIDSKIKVALGENG 455 (526)
Q Consensus 379 eGf~SiEeIa~a~~eeL~~I---eGfdee~a~eL~~rA~~~L~~~~~~~~e~~~e~~~~e~L~~l~gl~~~~~~~L~e~g 455 (526)
.+|.|++.++.++.++|.++ -||-.-.+..|++-|+....... .....+....-++|+.++|+.+.++....-.+
T Consensus 64 ~~~~t~~~la~a~~~eL~~~ir~~G~~~~Ka~~l~~~a~~i~~~~~--~l~~~~~~~~~~~L~~lpGIG~kTA~~il~~~ 141 (218)
T 1pu6_A 64 DDEINLKKIAYIEFSKLAECVRPSGFYNQKAKRLIDLSGNILKDFQ--SFENFKQEVTREWLLDQKGIGKESADAILCYA 141 (218)
T ss_dssp CHHHHHHHHHHSCHHHHHHHTGGGSCHHHHHHHHHHHHHHHHHHHS--SHHHHHHHCCHHHHHTSTTCCHHHHHHHHHHT
T ss_pred CCCCCHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH--HCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHH
T ss_conf 2489999997799999999999879958999999999999998663--10379946799999848996699999999998