HHsearch results for GI: 254780788 and protein with PDBid: 1q8k_A
>1q8k_A Eukaryotic translation initiation factor 2 subunit 1; NMR {Homo sapiens} SCOP: a.60.14.1 b.40.4.5 d.58.51.1
Probab=97.99 E-value=6.4e-05 Score=53.79 Aligned_cols=69 Identities=23% Similarity=0.323 Sum_probs=58.6
Q ss_pred HHCCCEEEEEEEECCCCEEEEEE---CCCEEEEEHHHCC------CCCCCCCCCEEEEEEEEECCCCCEEEEEEE--CCC
Q ss_conf 52083899999840576389995---7935874478748------875115276699999761135870289871--598
Q gi|254780788|r 136 DKVGEIISGTVKRVEYGNVIVDL---GNSDGVIRRDETI------SRENLRPGDRVKSYIYDVRREQRGPQVLLS--RTH 204 (526)
Q Consensus 136 ~r~Geiv~G~V~r~e~~~iiVdl---g~~ea~Lp~~e~i------p~E~~~~Gdrika~i~~V~~~~rgpqi~lS--Rt~ 204 (526)
.++|++|.|+|.++...+++|+| ++.+|++|.+|.- |++.|++|++++|.|..|+.+.+ +|.|| +..
T Consensus 11 Pe~GdiV~g~V~~i~~~GafV~L~ey~gieGli~isEls~~~i~~~~~~~kvGq~v~vkVl~vd~e~~--~I~LSlK~v~ 88 (308)
T 1q8k_A 11 PEVEDVVMVNVRSIQEMGAYVSLLEYNNIEGMIHLSELSRRRIRSINKLIRIGRNECVKVIRVDKEKG--YIDLSKRRVS 88 (308)
T ss_dssp CSSCCEEEEEEEEEETTEEEEESCTTTSCCEEECGGGTSCSSCSCCTTTCSSSCEEEEEEEEEETTTT--EEEEECSSCC
T ss_pred CCCCCEEEEEEEEEECCEEEEEECCCCCCEEEEEHHHCCCCCCCCHHHHCCCCCEEEEEEEEECCCCC--EEEEEECCCC
T ss_conf 99989999999999735599997179990899898987875448989916799999999967507772--7999952058
Q ss_pred HH
Q ss_conf 89
Q gi|254780788|r 205 PQ 206 (526)
Q Consensus 205 p~ 206 (526)
++
T Consensus 89 ~~ 90 (308)
T 1q8k_A 89 PE 90 (308)
T ss_dssp HH
T ss_pred HH
T ss_conf 46