HHsearch results for GI: 254780788 and protein with PDBid: 1wcn_A
>1wcn_A Transcription elongation protein NUSA; RNA-binding protein, escherichia coli NUSA, transcription regulation, regulation of RNA binding; NMR {Escherichia coli} PDB: 2jzb_B
Probab=97.14 E-value=0.00053 Score=47.04 Aligned_cols=55 Identities=33% Similarity=0.411 Sum_probs=51.0
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHHHH
Q ss_conf 1112258884678888773211147775058888776530588999999999999
Q gi|254780788|r 361 FFMQAINVDEIIAHLLVAEGFADVEELACVKISEIASIEGFDEETAVEIQGRARE 415 (526)
Q Consensus 361 ~f~e~LdVDE~iA~~LV~eGf~SiEeIa~a~~eeL~~IeGfdee~a~eL~~rA~~ 415 (526)
-+.+--+++..++..|..+|+.|++++|..++++|..|.|++++.|..|+-+|++
T Consensus 8 dL~~leG~~~~~~~~L~e~gI~t~edLAdls~dEL~ei~~i~ee~A~~lIM~AR~ 62 (70)
T 1wcn_A 8 DLLNLEGVDRDLAFKLAARGVCTLEDLAEQGIDDLADIEGLTDEKAGALIMAARN 62 (70)
T ss_dssp HHHSSTTCCHHHHHHHHTTTCCSHHHHHTSCHHHHHTSSSCCHHHHHHHHHHHHH
T ss_pred HHHHCCCCCHHHHHHHHHCCCCCHHHHHHHCHHHHHHHCCCCHHHHHHHHHHHHH
T ss_conf 9971789899999999996997499998728999987616899999999999986