HHsearch results for GI: 254780788 and protein with PDBid: 1zzk_A

>1zzk_A Heterogeneous nuclear ribonucleoprotein K; KH domian, alpha-beta fold, DNA binding protein; 0.95A {Homo sapiens} SCOP: d.51.1.1 PDB: 1zzj_A 1zzi_A

Probab=92.54  E-value=0.16  Score=28.81  Aligned_cols=36  Identities=28%  Similarity=0.457  Sum_probs=33.6

Q ss_pred             EEEEEECCCCCCCCCCCCHHHHHHHHHHHCCEEEEE
Q ss_conf             799998534221102544278999998616745785
Q gi|254780788|r  307 RIEVIVPKEQLSLAIGRRGQNVRLASQLTGWTIDII  342 (526)
Q Consensus       307 ~~~v~v~~~qls~AIGk~GqNvrLas~Ltg~~idi~  342 (526)
                      +..+.||.+....-|||+|.|++--.+.||-+|.|.
T Consensus         8 t~~i~VP~~~vg~iIGk~G~~I~~I~~~tga~I~i~   43 (82)
T 1zzk_A            8 TTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKID   43 (82)
T ss_dssp             EEEEEEETTTGGGGTCGGGHHHHHHHHHHCCEEEEC
T ss_pred             EEEEEECHHHCCCEECCCCHHHHHHHHHHCCEEEEC
T ss_conf             899999867505018979723899999739959974