HHsearch results for GI: 254780788 and protein with PDBid: 2a1j_A

>2a1j_A DNA repair endonuclease XPF; XPF, xeroderma pigmentosum, DNA repair, endonuclease, helix-hairpin-helix, DNA binding protein; HET: DNA; 2.70A {Homo sapiens} SCOP: a.60.2.5 PDB: 2kn7_A*

Probab=92.87  E-value=0.14  Score=29.35  Aligned_cols=49  Identities=22%  Similarity=0.369  Sum_probs=40.3

Q ss_pred             CCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHH
Q ss_conf             111225888467888877321114777505888877653058899999999
Q gi|254780788|r  361 FFMQAINVDEIIAHLLVAEGFADVEELACVKISEIASIEGFDEETAVEIQG  411 (526)
Q Consensus       361 ~f~e~LdVDE~iA~~LV~eGf~SiEeIa~a~~eeL~~IeGfdee~a~eL~~  411 (526)
                      .+....+|....+..|. ..|.|++++..++.++|.++.| .++.|..|.+
T Consensus         5 ~L~~IPGIg~~~~~~Ll-~~fgSi~~l~~as~eeL~~v~G-~~~~A~~i~~   53 (63)
T 2a1j_A            5 FLLKMPGVNAKNCRSLM-HHVKNIAELAALSQDELTSILG-NAANAKQLYD   53 (63)
T ss_dssp             HHHTSTTCCHHHHHHHH-HHCSSHHHHHTCCHHHHHHHHS-CHHHHHHHHH
T ss_pred             HHHCCCCCCHHHHHHHH-HHCCCHHHHHHCCHHHHHHCCC-CHHHHHHHHH
T ss_conf             88529998899999999-9867999998799999987869-8999999999