HHsearch results for GI: 254780788 and protein with PDBid: 2cqo_A

>2cqo_A Nucleolar protein of 40 kDa; S1 domain, OB-fold, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.70  E-value=0.00013  Score=51.44  Aligned_cols=67  Identities=19%  Similarity=0.226  Sum_probs=59.6

Q ss_pred             HCCCEEEEEEEECCCCEEEEEEC--CCEEEEEHHHCC------CCCCCCCCCEEEEEEEEECCCCCEEEEEEECC
Q ss_conf             20838999998405763899957--935874478748------87511527669999976113587028987159
Q gi|254780788|r  137 KVGEIISGTVKRVEYGNVIVDLG--NSDGVIRRDETI------SRENLRPGDRVKSYIYDVRREQRGPQVLLSRT  203 (526)
Q Consensus       137 r~Geiv~G~V~r~e~~~iiVdlg--~~ea~Lp~~e~i------p~E~~~~Gdrika~i~~V~~~~rgpqi~lSRt  203 (526)
                      ..|.|+.|+|.++..-.++|+|+  ..+|++|.++.-      |.+.|++||+|+|.|.+++...+..++-||..
T Consensus        21 e~g~I~~G~V~~V~~~G~FV~l~g~~~dGlvhisels~~~v~~~~~~~~vGd~V~vkVi~id~~~~r~~lsLs~k   95 (119)
T 2cqo_A           21 ALYTIFQGEVAMVTDYGAFIKIPGCRKQGLVHRTHMSSCRVDKPSEIVDVGDKVWVKLIGREMKNDRIKVSLSMK   95 (119)
T ss_dssp             CTTCEEEEEEEEEETTEEEEECTTCSSCEEEEHHHHCSSCCSCHHHHCCTTCEEEEEEEEEEECSSCEEEEEEST
T ss_pred             CCCCEEEEEEEEEECCEEEEEECCCCCEEEEEHHHHCCCCCCCHHHEECCCCEEEEEEEEEECCCCCCEEEEEEE
T ss_conf             789579999999965288999789872089866680466667988803899999999999978778648873602