HHsearch results for GI: 254780788 and protein with PDBid: 2fmp_A
>2fmp_A DNA polymerase beta; nucleotidyl transferase, transferase/DNA complex; HET: DNA DOC DCT; 1.65A {Homo sapiens} SCOP: a.60.6.1 a.60.12.1 d.218.1.2 PDB: 1bpx_A* 1bpz_A* 1mq2_A* 1mq3_A* 1bpy_A* 1tva_A* 1zjm_A* 1zjn_A* 1zqa_A* 1zqb_A* 1zqc_A* 1zqd_A* 1zqe_A* 1zqf_A* 1zqg_A* 1zqh_A* 1zqi_A* 1zqj_A* 1zqk_A* 1zql_A* ...
Probab=94.58 E-value=0.19 Score=28.25 Aligned_cols=36 Identities=28% Similarity=0.439 Sum_probs=18.6
Q ss_pred EEEEE-ECCCCCCCCC----CCCHHHHHH--HHHHHCCEEEEE
Q ss_conf 79999-8534221102----544278999--998616745785
Q gi|254780788|r 307 RIEVI-VPKEQLSLAI----GRRGQNVRL--ASQLTGWTIDII 342 (526)
Q Consensus 307 ~~~v~-v~~~qls~AI----Gk~GqNvrL--as~Ltg~~idi~ 342 (526)
++++. ||.++...|. |.+--|+.| -|+=-||+++=.
T Consensus 254 rVDl~~~~~~~~~~aLl~fTGS~~fn~~lR~~A~~kG~~Lne~ 296 (335)
T 2fmp_A 254 RIDIRLIPKDQYYCGVLYFTGSDIFNKNMRAHALEKGFTINEY 296 (335)
T ss_dssp EEEEEECCGGGHHHHHHHHHCCHHHHHHHHHHHHHTTEEECSS
T ss_pred EEEEEECCHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCHH
T ss_conf 6899977889999999985376999999999999859917441