HHsearch results for GI: 254780788 and protein with PDBid: 2jvz_A
>2jvz_A KH type-splicing, FAR upstream element-binding protein 2; RNA binding protein, KH domain, KSRP, posttranscriptional regulation, mRNA decay; NMR {Homo sapiens}
Probab=96.62 E-value=0.0015 Score=43.82 Aligned_cols=95 Identities=19% Similarity=0.303 Sum_probs=64.4
Q ss_pred CCEEEEECCCCHHHHHHHHHHCCCCEEEEECCCC-------------------HHHHHHHHCCCCCCCEE-----EECCC
Q ss_conf 8127655488621788998627782679955987-------------------89999976286654248-----98756
Q gi|254780788|r 249 DPVGACVGMRGSRVQAVVTELRDEKIDIVVWSPD-------------------SATFVINALRPAIVTKV-----VLDED 304 (526)
Q Consensus 249 DpVGAcVG~rGsRiq~I~~EL~gEkIDii~ws~d-------------------~~~fi~nAl~PA~v~~v-----~~de~ 304 (526)
+-+|..+|.+|+.|+.+.++- |=+|.+...+++ ...+|.+.+........ .....
T Consensus 11 ~~vg~iIGk~G~~I~~i~~~t-g~~i~~~~~~~~~~~~~~~v~I~G~~~~v~~a~~~i~~~~~~~~~~~~~~~~~~~~~~ 89 (164)
T 2jvz_A 11 GKAGLVIGKGGETIKQLQERA-GVKMILIQDGSQNTNVDKPLRIIGDPYKVQQACEMVMDILRERDQGGFGDRNEYGSRI 89 (164)
T ss_dssp TCHHHHTCTTTHHHHHHHHTS-CSEEEECCCTTSSSSSCEEEEEEECHHHHHHHHHHHHHHTTCSSSCCCSSCSSCTTSC
T ss_pred HHCCEEECCCCHHHHHHHHHH-CCEEEEECCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
T ss_conf 670746889987899999997-9859982576656666406998388899999999887666542122332123556655
Q ss_pred CCEEEEEECCCCCCCCCCCCHHHHHHHHHHHCCEEEEEEC
Q ss_conf 7879999853422110254427899999861674578552
Q gi|254780788|r 305 VGRIEVIVPKEQLSLAIGRRGQNVRLASQLTGWTIDIITE 344 (526)
Q Consensus 305 ~~~~~v~v~~~qls~AIGk~GqNvrLas~Ltg~~idi~~~ 344 (526)
...+.+.||.++.+..|||+|+|+|--...||-+|++...
T Consensus 90 ~~~~~i~VP~~~vg~IIGk~G~~Ik~I~~~tg~~I~i~~~ 129 (164)
T 2jvz_A 90 GGGIDVPVPRHSVGVVIGRSGEMIKKIQNDAGVRIQFKQD 129 (164)
T ss_dssp SSSBCCEEETTTHHHHHCSSSHHHHHHHHHTCCEEEECCC
T ss_pred CCEEEECCCHHHCEEEECCCCHHHHHHHHHHCCEEEECCC
T ss_conf 4113312665445158889966599999964976886388