HHsearch results for GI: 254780788 and protein with PDBid: 2khi_A
>2khi_A 30S ribosomal protein S1; acetylation, phosphoprotein, ribonucleoprotein, RNA-binding; NMR {Escherichia coli}
Probab=97.99 E-value=2.9e-05 Score=56.33 Aligned_cols=74 Identities=18% Similarity=0.355 Sum_probs=61.7
Q ss_pred HHHHHHHHH--HCCCEEEEEEEECCCCEEEEEEC-CCEEEEEHHHCC-------CCCCCCCCCEEEEEEEEECCCCCEEE
Q ss_conf 877999985--20838999998405763899957-935874478748-------87511527669999976113587028
Q gi|254780788|r 128 DRQYLEFKD--KVGEIISGTVKRVEYGNVIVDLG-NSDGVIRRDETI-------SRENLRPGDRVKSYIYDVRREQRGPQ 197 (526)
Q Consensus 128 ~~i~~ef~~--r~Geiv~G~V~r~e~~~iiVdlg-~~ea~Lp~~e~i-------p~E~~~~Gdrika~i~~V~~~~rgpq 197 (526)
..-+++|.. .+|+++.|+|.++....++|+|+ +.+|++|.+++- |...|++||.|++.|.+|..+.+ +
T Consensus 18 ~dPw~~~~~k~~vG~iv~G~V~~I~d~G~fV~l~~~i~Gli~~sels~~~~~~~~~~~~~vG~~v~vkVi~vD~~~~--k 95 (115)
T 2khi_A 18 GSHWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERR--R 95 (115)
T ss_dssp ---CCCSSCSSCSSCEEEEEEEEEETTEEEEECSTTCEEEEETTSSSCSSTTCSSTTTCCTTCEEEEEEEEEETTTT--E
T ss_pred CCCHHHHHHHCCCCCEEEEEEEEEECCEEEEEECCCCEEEEEEEEECCCCEECCHHHEECCCCEEEEEEEEEECCCC--E
T ss_conf 99289999658998999999999968669999799978999986303532013631220699899999999989999--9
Q ss_pred EEEECC
Q ss_conf 987159
Q gi|254780788|r 198 VLLSRT 203 (526)
Q Consensus 198 i~lSRt 203 (526)
|.||+-
T Consensus 96 I~LS~K 101 (115)
T 2khi_A 96 ISLGLK 101 (115)
T ss_dssp EEECCC
T ss_pred EEEEEE
T ss_conf 999875