HHsearch results for GI: 254780788 and protein with PDBid: 2rf4_A
>2rf4_A DNA-directed RNA polymerase I subunit RPA4; transferase DNA/RNA, DNA-binding, phosphorylation, POL I, POLI, rpoli, nuclear protein; 3.10A {Saccharomyces cerevisiae}
Probab=94.45 E-value=0.11 Score=30.10 Aligned_cols=69 Identities=10% Similarity=0.143 Sum_probs=53.6
Q ss_pred HHHHHCCCEEEEEEEECCCCEEEEEE-CCCEEEEEHHHCCC------------------CCCCCCCCEEEEEEEEECCCC
Q ss_conf 99852083899999840576389995-79358744787488------------------751152766999997611358
Q gi|254780788|r 133 EFKDKVGEIISGTVKRVEYGNVIVDL-GNSDGVIRRDETIS------------------RENLRPGDRVKSYIYDVRREQ 193 (526)
Q Consensus 133 ef~~r~Geiv~G~V~r~e~~~iiVdl-g~~ea~Lp~~e~ip------------------~E~~~~Gdrika~i~~V~~~~ 193 (526)
-|+.+.|+++.|+|..+...++.+-+ |--.+.+|+.++-+ +..++.|+.||+-|..|..+.
T Consensus 124 VF~P~~GevLeG~V~~~s~~~I~l~V~g~fna~I~~~~lp~~~~f~~~~~~~~~~~~~~~~~~kvg~~IrFrVksv~~~~ 203 (214)
T 2rf4_A 124 VWQPQVGDVLEGYIFIQSASHIGLLIHDAFNASIKKNNIPVDWTFVHNDGNRSLGHWVDSNGEPIDGKLRFTVRNVHTTG 203 (214)
T ss_dssp EECCCTTCEEEEEECCCCSSCEEEEETTTEEEEECSTTSCSSCBCCCCSCC-CCCCCBCSSCCBCCSEEEEEEEEEECCS
T ss_pred EEECCCCCEEEEEEEEECCCEEEEEEECCEEEEECHHHCCCCCEECCCCCCCEEEEECCCCCCCCCCEEEEEEEEEEEEC
T ss_conf 98368999999999999999379999796877700778897420026777420005236565326999999999998429
Q ss_pred CEEEEEEE
Q ss_conf 70289871
Q gi|254780788|r 194 RGPQVLLS 201 (526)
Q Consensus 194 rgpqi~lS 201 (526)
+-+.|.=|
T Consensus 204 ~~lsI~Gs 211 (214)
T 2rf4_A 204 RVVSVDGT 211 (214)
T ss_dssp SSCEEEEE
T ss_pred CEEEEEEE
T ss_conf 99999999