HHsearch results for GI: 254780788 and protein with PDBid: 2zj8_A
>2zj8_A DNA helicase, putative SKI2-type helicase; RECA fold, ATP-binding, hydrolase, nucleotide- binding; 2.00A {Pyrococcus furiosus} PDB: 2zj5_A* 2zj2_A 2zja_A*
Probab=96.88 E-value=0.001 Score=44.91 Aligned_cols=65 Identities=22% Similarity=0.319 Sum_probs=55.0
Q ss_pred HHHCCCCCCHHHHHHHHHCCCCCHHHHHHCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCC
Q ss_conf 66407799989999999879847889653267752123123444321124533435889999999999841225788800
Q gi|254780788|r 436 ELCSIPGIDSKIKVALGENGIKTMEDLAGCSVDDLLGWSENKGGNIEKFDGFLSSLGTPKDQVESMIIHARYKMGWIEKE 515 (526)
Q Consensus 436 ~L~~l~gl~~~~~~~L~e~gIktleDlAels~dEL~~~~~~~~~~~~~~~gil~~~~l~~~~A~~lIM~AR~~~gWf~~e 515 (526)
.|+.++|+++..+-.|.++|++|++|+|.++.++|..+. ++.+..|..+.-.++..+.|.+..
T Consensus 647 ~L~~i~~ig~~~ar~L~~~G~~s~~~i~~~~~~~l~~v~-----------------g~g~k~a~~i~~~~~~~~~~~~~~ 709 (720)
T 2zj8_A 647 PLMQLPLVGRRRARALYNSGFRSIEDISQARPEELLKIE-----------------GIGVKTVEAIFKFLGKNVKISEKP 709 (720)
T ss_dssp GGTTSTTCCHHHHHHHHTTTCCSHHHHHTCCHHHHHTST-----------------TCCHHHHHHHHHHHC---------
T ss_pred CCCCCCCCCHHHHHHHHHCCCCCHHHHHCCCHHHHHHCC-----------------CCCHHHHHHHHHHHCHHCCCCCCC
T ss_conf 622789999999999998799999999749988985276-----------------948999999997445005852153
Q ss_pred CC
Q ss_conf 02
Q gi|254780788|r 516 KV 517 (526)
Q Consensus 516 ~~ 517 (526)
..
T Consensus 710 ~~ 711 (720)
T 2zj8_A 710 RK 711 (720)
T ss_dssp --
T ss_pred CC
T ss_conf 30