HHsearch results for GI: 254780788 and protein with PDBid: 2zj8_A

>2zj8_A DNA helicase, putative SKI2-type helicase; RECA fold, ATP-binding, hydrolase, nucleotide- binding; 2.00A {Pyrococcus furiosus} PDB: 2zj5_A* 2zj2_A 2zja_A*

Probab=96.43  E-value=0.058  Score=32.10  Aligned_cols=56  Identities=25%  Similarity=0.286  Sum_probs=49.6

Q ss_pred             CCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHHHHHH
Q ss_conf             11225888467888877321114777505888877653058899999999999999
Q gi|254780788|r  362 FMQAINVDEIIAHLLVAEGFADVEELACVKISEIASIEGFDEETAVEIQGRAREYL  417 (526)
Q Consensus       362 f~e~LdVDE~iA~~LV~eGf~SiEeIa~a~~eeL~~IeGfdee~a~eL~~rA~~~L  417 (526)
                      ++...+|....|..|..+||.|+++|+.++.++|..++||.+.+|+.++.-+..-+
T Consensus       648 L~~i~~ig~~~ar~L~~~G~~s~~~i~~~~~~~l~~v~g~g~k~a~~i~~~~~~~~  703 (720)
T 2zj8_A          648 LMQLPLVGRRRARALYNSGFRSIEDISQARPEELLKIEGIGVKTVEAIFKFLGKNV  703 (720)
T ss_dssp             GTTSTTCCHHHHHHHHTTTCCSHHHHHTCCHHHHHTSTTCCHHHHHHHHHHHC---
T ss_pred             CCCCCCCCHHHHHHHHHCCCCCHHHHHCCCHHHHHHCCCCCHHHHHHHHHHHCHHC
T ss_conf             22789999999999998799999999749988985276948999999997445005